DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and SPCC18.02

DIOPT Version :9

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_588381.1 Gene:SPCC18.02 / 2538923 PomBaseID:SPCC18.02 Length:448 Species:Schizosaccharomyces pombe


Alignment Length:458 Identity:111/458 - (24%)
Similarity:193/458 - (42%) Gaps:85/458 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VNQRR---LILVIVSIALLLDNMLYMVIVPIIPDYLREIGSFDDGPTPPPLRDNITGKIIPVHHD 89
            |.|||   .|:..::|||..|..||.:|.||:|..|.:    ..|.:|    |.:          
pombe     7 VKQRRSLPFIIGTIAIALFTDLFLYGIITPILPFSLVD----RVGISP----DRV---------- 53

  Fly    90 HHGQDSATGILFASKAIVQLMVNPFSGGLIDK-IGYDLPMMIGLTIMFFSTAVFACGSSYSVLFF 153
                .|....|.|..|:..:..:...|.|.|| :...:||:|||..:..:||:...|:|..:|..
pombe    54 ----QSVISTLLAVYAVANIAASSPIGFLADKFLTRKVPMLIGLIFLTSATALLTFGNSVPMLIV 114

  Fly   154 ARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEVPF 218
            ||.|||..:|...|.|||::.|....:|..|...|| ..|||.|.::||.|||.:|:..|....|
pombe   115 ARVLQGLSAAVVWTVGLALLVDVVGADNVGSTMGGI-FGFISLGEIIAPVFGGIVYESLGYYASF 178

  Fly   219 LILALVCLLDGLMLLLVMKP------------VKEAMKQSKDVQDQ-------------VIPIWR 258
            .:..::.|||..:..|:::|            .:.::.|.:|.||.             .:||:.
pombe   179 GVCFIILLLDIALRFLMIEPREMKNDSTLQDVERTSILQRQDTQDHELKPKRSGLFSSLCLPIYS 243

  Fly   259 LLMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTTDNWKIGMVW----LPAFFPHV-LGVVI 318
            ||....|........:::...:..:.||.|.::.....::.:.|:::    .|.||... .|.::
pombe   244 LLHHKQIFGPFWTSFVNSCLFSAFDATIPLELKTLFDFNSLQCGLMFGVLSTPYFFCGAWAGAMV 308

  Fly   319 TVKMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKMLMLPICVICFGIAL--IDTALLPTLGY 381
            ..:.:|...:..:       |:.|.:.|::  |.......|.|.:....:|:  :..|...:.|:
pombe   309 DRRGSRTIGKRAY-------AILGCTLFLL--CIPRTNTSLNIYLFSAFLAINGVVLAFTSSPGF 364

  Fly   382 LVDVRYVS--------------VYGSIYAIADISYSIAYAVGPIIAGGVVEAIGF---TALNFLI 429
            :....||:              .|..:::..:|.||:...:||::||.:.:...|   .|...|:
pombe   365 VQSSHYVAEYELEHPTFFGHNGPYTQLFSAYNIVYSLGMIIGPLVAGFLRDQFNFITSIACLSLL 429

  Fly   430 AFS 432
            .||
pombe   430 CFS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_1 88..410 CDD:284993 83/368 (23%)
2_A_01_02 98..238 CDD:273318 48/140 (34%)
SPCC18.02NP_588381.1 MFS 17..437 CDD:119392 106/448 (24%)
MFS_1 20..407 CDD:284993 97/418 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 1.000 Domainoid score I2277
eggNOG 1 0.900 - - E1_KOG3764
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I1778
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 1 1.000 - - otm46977
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23506
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2004
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.950

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