DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VAChT and LOC101732756

DIOPT Version :9

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_031762366.1 Gene:LOC101732756 / 101732756 -ID:- Length:515 Species:Xenopus tropicalis


Alignment Length:536 Identity:191/536 - (35%)
Similarity:290/536 - (54%) Gaps:84/536 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYL----REIGSFDD--GPTPPP----- 74
            |  ::|....|:|||:||.|||||||||..|:|||||.||    .|..|..|  .|:..|     
 Frog    11 W--LREGRQSRKLILLIVFIALLLDNMLLTVVVPIIPSYLYTMTHEGNSSQDEAHPSTAPGGSHS 73

  Fly    75 ---LRDNITGKIIPVHHDHHGQDSA--------------------------------TGILFASK 104
               ..||.|..|.......|...||                                .|:|||||
 Frog    74 IFSYYDNTTVTITNSTRSTHQPRSAVTPTSSPSPSPPTAPPADCPRADSSLLNENVKVGLLFASK 138

  Fly   105 AIVQLMVNPFSGGLIDKIGYDLPMMIGLTIMFFSTAVFACGSSYSVLFFARSLQGAGSAFADTAG 169
            |.|||:.|||.|.:.::|||.:||..|..|||.||.:||...||::||.||||||.||:.:..||
 Frog   139 ATVQLLTNPFIGPMTNRIGYQIPMFAGFCIMFVSTIMFAFSGSYALLFIARSLQGIGSSCSSVAG 203

  Fly   170 LAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILALVCLLDGLMLLL 234
            :.|:|..:|::.||..|:||||..::.|.||.||||..||:|.||..|||:||::.|.||.:.|.
 Frog   204 MGMLASVYTDDEERGNAMGIALGGLAMGVLVGPPFGSILYEFVGKTAPFLVLAVLVLFDGALQLF 268

  Fly   235 VMKPVKEAMKQSKDVQDQV---IPIWRLLMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTT 296
            |::|.:        ||.:.   .|:..|:.||||.:.||::..:|:|:|.|||.:.:||.:.|.:
 Frog   269 VLQPSR--------VQPESQTGTPLLTLIRDPYILIAAGSICFANMAIAMLEPALPIWMMETMCS 325

  Fly   297 DNWKIGMVWLPAFFPHVLGVVITVKMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKMLMLPI 361
            ..|::|:.:|||...:::|..:...:|.|  ..:||.|..|:.:.|.|...:||......|:.|.
 Frog   326 RKWQLGVAFLPASISYLIGTNVFGPLAHK--MGRWLCAFIGMIVVGISIICVPFARNIYGLIAPT 388

  Fly   362 CVICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIGFTALN 426
            ..:.|.|.::|::::|.:|||||:|:||||||:|||||:::.:.:|.||...|.:.::|||..|.
 Frog   389 FGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGSVYAIADVAFCMGFAFGPSAGGAIAKSIGFPWLM 453

  Fly   427 FLIAFSNLAYVPVLRKLRNIYDFKPFENEANILMQDPPNKEYQTYVMHDQK-PVEGGVKNHLE-Y 489
            .:|...::.:.|:.                 :.::.||.:|.:..::.|.. |::  .|.:.: .
 Frog   454 TIIGVVDVLFAPLC-----------------LFLRSPPAREEKMAILMDHNCPIK--TKMYTQNS 499

  Fly   490 GQQYQ--QEQETNLDD 503
            ||.|.  :|:|:..|:
 Frog   500 GQPYYTGEEEESESDE 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_1 88..410 CDD:284993 136/356 (38%)
2_A_01_02 98..238 CDD:273318 73/139 (53%)
LOC101732756XP_031762366.1 MFS_SLC18A1_2_VAT1_2 22..471 CDD:340942 175/475 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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