DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and LOC100496053

DIOPT Version :10

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_002932792.2 Gene:LOC100496053 / 100496053 XenbaseID:XB-GENE-29082975 Length:494 Species:Xenopus tropicalis


Alignment Length:496 Identity:169/496 - (34%)
Similarity:265/496 - (53%) Gaps:68/496 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 W--EKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLREIGSFDD--------GPTPPPL 75
            |  ||.:.|    .|:||:|.:||||||:|..::||:|||||.| ..|.:        ...|.|.
 Frog    18 WLKEKRESP----HLVLVVVFLALLLDNLLLTIVVPVIPDYLYE-SEFVNKTAVEAKMSSIPAPD 77

  Fly    76 RDNITGKIIPVHH------DHH--------------------GQDSATGILFASKAIVQLMVNPF 114
            ..:...:::...:      |.|                    .::...|:|.|||::|.::|||.
 Frog    78 SSSFLSRLLYYRYNELLFSDEHENSTKGLLKEPCRKDTNFLRDENVPVGLLIASKSMVHILVNPI 142

  Fly   115 SGGLIDKIGYDLPMMIGLTIMFFSTAVFACGSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTE 179
            .....:::||.|||..|..||..|..:||.|.||..|..||.|||.||:|...|||.|:|..:|:
 Frog   143 VSLFTNRVGYGLPMFFGFLIMLMSIFMFAFGGSYVFLLLARMLQGIGSSFTVVAGLGMVASIYTD 207

  Fly   180 ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILALVCLLDGLMLLLVMKP-VKEAM 243
            :.:|.:|:||||..:..|.:..||||.|||:|.||..|||.||.:.||||.:.|.::.| :..|:
 Frog   208 DYQRGKAMGIALGGVVLGVVAGPPFGSALYEFVGKASPFLFLAALALLDGALQLFILTPKISPAV 272

  Fly   244 KQSKDVQDQVIPIWRLLMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTTDNWKIGMVWLPA 308
            .....       ...||.||||.|.||.|.::::.:..||||:.:||..:|.:.:|:||:|:|||
 Frog   273 TTPPS-------FCSLLKDPYILVAAGCLCIASMGIGMLEPTLPIWMLGSMCSPDWQIGLVFLPA 330

  Fly   309 FFPHVLGVVITVKMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKMLMLPICVICFGIALIDT 373
            ...:::...:...::.|:  .:||.:..|:.|.|.....:|.......|:.||..|...:.::|:
 Frog   331 SLSYLVCTNVFGILSHKF--GRWLCSLLGMVLLGICLLCMPLAFNILGLIAPIAGIGVSLGIVDS 393

  Fly   374 ALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIGFTALNFLIAFSNLAYVP 438
            :::|.:|||||:|:.||||.:|||:||::|..||:||..||.:.:||||..|..:|...|:.|.|
 Frog   394 SIMPIMGYLVDLRHSSVYGGVYAISDIAFSFGYAIGPSAAGAIAKAIGFPMLMVIIGVLNIIYCP 458

  Fly   439 VLRKLRNIYDFKPFENEANILMQDPPNKEYQTYVMHDQKPV 479
            :.                 :|:::||.||.:..:::.:..|
 Frog   459 LC-----------------VLLRNPPMKEERRALLNHESIV 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_SLC18A3_VAChT 35..444 CDD:340941 158/443 (36%)
LOC100496053XP_002932792.2 MFS_SLC18A1_2_VAT1_2 116..464 CDD:340942 136/373 (36%)

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