DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and LOC100495897

DIOPT Version :9

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_002932791.2 Gene:LOC100495897 / 100495897 -ID:- Length:467 Species:Xenopus tropicalis


Alignment Length:465 Identity:144/465 - (30%)
Similarity:243/465 - (52%) Gaps:44/465 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLREIG------SFDDGPTPPPLRDNI 79
            |  :|:....|.|:|::|::||.:|.:|..||.||:|..|  ||      |.....|...|.||.
 Frog     9 W--LQKTRESRILVLIVVTVALFVDCILNTVIAPILPTLL--IGKNTSNSSVVSNYTFTLLPDNS 69

  Fly    80 TGKIIPVHH---------------DHHGQDSATGILFASKAIVQLMVNPFSGGLIDKIGYDLPMM 129
            :..|..:.:               :..|||...|:|.|.|.::|::.||..|.|.::.|||.|::
 Frog    70 SKGIYQLQNANGTQDGECYTKGKENSDGQDFRIGLLLAFKGMLQIVANPIVGVLTNRFGYDAPLL 134

  Fly   130 IGLTIMFFSTAVFACGSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFI 194
            :|..::||||.::|.|..|..|..||.|||.||:.....|||::|:.|.::.||::|:.|:.:.:
 Frog   135 VGFAVVFFSTLMYAFGEQYVFLCVARGLQGIGSSLTTVPGLALLANTFPDDEERAKAMAISTSGL 199

  Fly   195 SFGCLVAPPFGGALYQFAGKEVPFLILALVCLLDGLMLLLVMKPVKEAMKQSKDVQDQVIPIWRL 259
            :.|.||..|||..:..|.||..||.:||.|.||||.:.|.:::|      :.........|...|
 Frog   200 AVGALVGAPFGSLMNGFFGKSSPFYVLAAVTLLDGALRLCILRP------KFSPGSIPATPYLTL 258

  Fly   260 LMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTTDNWKIGMVWLPAFFPHVLGV----VITV 320
            |.||||.|......::.:..:.|:..:.:.|.::|...::::|:.::||....:|.:    ::::
 Frog   259 LADPYILVPVVGYFLNKLNSSILQAIVPVRMMEHMCAPSYQLGLAFVPAMLTTILTLNGFAILSL 323

  Fly   321 KMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKMLMLPICVICFGIALIDTALLPTLGYLVDV 385
            |..|      ||....|..::|.....:|..:....|:.|..|:..|.||:..:::|.:.||:|:
 Frog   324 KWGR------WLCLMLGFIIQGIGIICLPLAANIFGLIGPSIVLGIGTALVGASIMPLMAYLIDL 382

  Fly   386 RYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIGFTALNFLIAFSNLAYVPVLRKLRNIY--- 447
            |:.||||.:|||.|.:..:.:|:||:..|.:..|||||.:..::....:.|.|:...|||:.   
 Frog   383 RHTSVYGGVYAITDAALCLGFAIGPLFGGAIASAIGFTWVMVILCVLLIIYAPLFILLRNVSGKD 447

  Fly   448 DFKPFENEAN 457
            :.||..|:.|
 Frog   448 EKKPILNQEN 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_1 88..410 CDD:284993 103/340 (30%)
2_A_01_02 98..238 CDD:273318 57/139 (41%)
LOC100495897XP_002932791.2 MFS 20..441 CDD:421695 133/434 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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