DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and LOC100495571

DIOPT Version :9

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_002932789.2 Gene:LOC100495571 / 100495571 -ID:- Length:468 Species:Xenopus tropicalis


Alignment Length:465 Identity:143/465 - (30%)
Similarity:243/465 - (52%) Gaps:43/465 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLREIG------SFDDGPTPPPLRDNI 79
            |  :|:....|.|||::|::||.:|.::..||.||:|..|  ||      |.....|...|.||.
 Frog     9 W--LQKTRESRILILIVVTVALFVDCIINTVIAPILPTLL--IGKNTSNSSVVSNYTSTLLPDNS 69

  Fly    80 TGKIIPVHH---------------DHHGQDSATGILFASKAIVQLMVNPFSGGLIDKIGYDLPMM 129
            :..|..:.:               :..||:...|:|.|.|.::|::.||..|.|.::.|||.|::
 Frog    70 SKGIYQLQNANGTQDGECYTKGKENSDGQEFWIGLLLAFKGMLQMVANPIVGVLTNRFGYDAPLL 134

  Fly   130 IGLTIMFFSTAVFACGSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFI 194
            :|..::||||.::|.|..|..|..||.|||.||:.....|||::|:.|.::.||::|:.|:.:.:
 Frog   135 VGFAVVFFSTLMYAFGEQYVFLCVARGLQGIGSSLTIIPGLALLANTFPDDEERAKAMAISTSGL 199

  Fly   195 SFGCLVAPPFGGALYQFAGKEVPFLILALVCLLDGLMLLLVMKPVKEAMKQSKDVQDQVIPIWRL 259
            :.|.|:..|||..:....||..||.:||.|.||||.:.|.:::|.|.:....     ...|...|
 Frog   200 TVGILLGAPFGSLMNGSFGKSSPFYVLAAVTLLDGALRLCILRPSKFSPGSI-----PATPYLTL 259

  Fly   260 LMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTTDNWKIGMVWLPAFFPHVLGV----VITV 320
            |.||||.|......::.:..:.|:..:.:.|.::|...::::|:.::||....:|.:    ::::
 Frog   260 LADPYILVTVVGYFLTKLHSSLLQAIVPIRMMEHMCAPSYQLGLAFVPAMLTTILTLNGFAILSL 324

  Fly   321 KMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKMLMLPICVICFGIALIDTALLPTLGYLVDV 385
            |..|      ||....|..::|......|..:....|:.|..|:..|.||:..:::|.:.||:|:
 Frog   325 KWGR------WLCLMLGFIIQGIGIICFPLAANIFGLIGPSIVLGIGTALVGASIMPLMAYLIDL 383

  Fly   386 RYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIGFTALNFLIAFSNLAYVPVLRKLRNIY--- 447
            |:.||||.||||.|.::.:.:|:||:..|.:..|||||.:..::....:.|.|:...|||:.   
 Frog   384 RHTSVYGGIYAITDAAFCLGFAIGPLFGGAIASAIGFTWVMVILCVLLIIYAPLFILLRNVSGKD 448

  Fly   448 DFKPFENEAN 457
            :.||..|:.|
 Frog   449 EKKPILNQEN 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_1 88..410 CDD:284993 102/340 (30%)
2_A_01_02 98..238 CDD:273318 55/139 (40%)
LOC100495571XP_002932789.2 MFS 20..442 CDD:421695 132/434 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59108
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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