DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and LOC100487393

DIOPT Version :9

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_002932741.2 Gene:LOC100487393 / 100487393 -ID:- Length:497 Species:Xenopus tropicalis


Alignment Length:483 Identity:171/483 - (35%)
Similarity:266/483 - (55%) Gaps:66/483 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLRE----------------------- 62
            |  ::|....|:|:||:|.:||||||||:.|:|||||.:|.|                       
 Frog     9 W--LKEKRESRQLVLVVVCVALLLDNMLFTVVVPIIPSFLYEKELKNASVTTTELHSPISAYNSS 71

  Fly    63 ---IGSFDDGPTPPPLRDNITGKIIPVHHDHHGQDSATGILFASKAIVQLMVNPFSGGLIDKIGY 124
               ..|..|.||      |.:.|.....|..|.::...|:||||||||||:|||..|.:.::.|:
 Frog    72 VLFNASLHDSPT------NSSNKCEKKKHTLHSENVQVGLLFASKAIVQLLVNPLVGLITNRFGF 130

  Fly   125 DLPMMIGLTIMFFSTAVFACGSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTEENERSQALGI 189
            |.|:..|..|:|.||.:||...||::||.|||:||.||:|:..|||.::|..:.::.||.||:||
 Frog   131 DAPLFAGFVILFLSTLMFAFSGSYALLFVARSIQGIGSSFSSVAGLGLLASVYMDDFERGQAMGI 195

  Fly   190 ALAFISFGCLVAPPFGGALYQFAGKEVPFLILALVCLLDGLMLLLVMKPVKEAMKQSKDVQDQVI 254
            ||..::.|.|...|||..:|:|.|:..|||:||.:.||||.:.|.:::|.|.:...:...     
 Frog   196 ALTGLAVGVLAGAPFGSVMYEFVGRSSPFLVLAALALLDGALQLCILRPSKFSPTTAAPT----- 255

  Fly   255 PIWRLLMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTTDNWKIGMVWLPAFFPHVLGV--- 316
            |...||.||||.|.|..|.::|:|:..||||:.:||.:.|.:.:|::|:.:|||...:::..   
 Frog   256 PYHELLRDPYILVAAACLWIANMAVGMLEPTLPIWMMETMCSPDWQLGIAFLPASVAYLICTNLF 320

  Fly   317 -VITVKMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKMLMLPICVICFGIALIDTALLPTLG 380
             :::.||.|      ||.:..|:.:.|.....:|.......|:.|...|...:.::|::::|.:|
 Frog   321 GILSHKMGR------WLCSMLGMIVVGGGLLCVPLARNIYGLIGPNAAIGIALGMVDSSIMPIMG 379

  Fly   381 YLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIGFTALNFLIAFSNLAYVPVLRKLRN 445
            ||||:|:.||||.||||.|.:..:.:||||.:||.:...|||:.|..:|...|:.:.|:.     
 Frog   380 YLVDLRHTSVYGGIYAICDTALCLGFAVGPSLAGVIASNIGFSWLMVIIGIINILFSPLC----- 439

  Fly   446 IYDFKPFENEANILMQDPPNKEYQTYVM 473
                        ||:::||.||.:..::
 Frog   440 ------------ILLRNPPAKEEKVAIL 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_1 88..410 CDD:284993 125/325 (38%)
2_A_01_02 98..238 CDD:273318 67/139 (48%)
LOC100487393XP_002932741.2 MFS_SLC18A1_2_VAT1_2 31..443 CDD:340942 156/445 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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