DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10252 and cimap1a

DIOPT Version :10

Sequence 1:NP_651171.1 Gene:CG10252 / 42794 FlyBaseID:FBgn0039104 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001015830.1 Gene:cimap1a / 548547 XenbaseID:XB-GENE-5889414 Length:256 Species:Xenopus tropicalis


Alignment Length:249 Identity:83/249 - (33%)
Similarity:108/249 - (43%) Gaps:38/249 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RPFGP------GPG-VYMLPPTVGYDKHDNRKQRLPQYSFGMRTRAPGEDLGPGPGAYKVDKLTR 61
            ||.||      .|| .|.||...|:..||..:.|.|.||.|.|.....:|..||||......:|.
 Frog    14 RPRGPIAALYSSPGPKYSLPGNTGFVSHDPSRYRAPAYSMGNRRFKFVDDCSPGPGYLVPSNITV 78

  Fly    62 YGTSKGLEFSMAPRTNVIDKRSSPGPGAHDVHNRPFFKGVNAPSYSMGLRTDFNFKKDGPGPNAY 126
            .|......:|:..|...|....:||||::...........:||:||:|.||........|||.||
 Frog    79 KGKDGTPAYSIYGRPKDISSFRTPGPGSYSPERAGKSAYRSAPTYSLGERTKTFSNDQTPGPAAY 143

  Fly   127 KYEVNAVRPGV-----------PSYSMGLQTKI------LNKTNSPGPAAYGGGDINVKLTRAPI 174
                  |.|.|           |:|||..::||      |.:|  |||..|...|......|.|.
 Frog   144 ------VLPSVIGPRIVNRISAPNYSMTGRSKIGSFHEDLQRT--PGPGTYRVIDPGSYKHRPPQ 200

  Fly   175 YSMQPRTTIPGE-NVGPGPNYYD---LMYYRPGKSGPGYSFGVRHHQFAPPMIV 224
            |||..|..:||: .:.|||..|.   ::..||  ..|.:|||:||..:..|:||
 Frog   201 YSMTARNVLPGDTTIKPGPGAYSPEKVVMSRP--QAPNFSFGIRHSDYVAPLIV 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10252NP_651171.1 None
cimap1aNP_001015830.1 STPGR 1 66..92 7/25 (28%)
STPGR 2 181..206 10/24 (42%)
STPGR 3 217..242 10/26 (38%)

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