DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10254 and eff

DIOPT Version :9

Sequence 1:NP_651170.1 Gene:CG10254 / 42793 FlyBaseID:FBgn0027512 Length:1398 Species:Drosophila melanogaster
Sequence 2:NP_001262578.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster


Alignment Length:119 Identity:35/119 - (29%)
Similarity:59/119 - (49%) Gaps:17/119 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1157 MVGPKRTPYQNALFFFDFQFGRDYPKSPPVCHYISYCTDRLNPNLYEGGRVCVSLLGTWMGRDNE 1221
            ::||..:|||..:||....|..|||..||   .:::.|...:||:...|.:|:.:|       ..
  Fly    37 IMGPPDSPYQGGVFFLTIHFPTDYPFKPP---KVAFTTRIYHPNINSNGSICLDIL-------RS 91

  Fly  1222 VWSPSSTMLQVLVSIQGLIL---VDEPYYNEAG----YEKQRGTQLGNENSRVY 1268
            .|||:.|:.:||:||..|:.   .|:|...|..    .::::..:|..|.:|.|
  Fly    92 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKY 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10254NP_651170.1 UQ_con 1126..1272 CDD:278603 35/119 (29%)
effNP_001262578.1 UBCc 1..146 CDD:412187 35/119 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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