DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10254 and ube2d2

DIOPT Version :9

Sequence 1:NP_651170.1 Gene:CG10254 / 42793 FlyBaseID:FBgn0027512 Length:1398 Species:Drosophila melanogaster
Sequence 2:NP_957253.1 Gene:ube2d2 / 393934 ZFINID:ZDB-GENE-120312-1 Length:147 Species:Danio rerio


Alignment Length:130 Identity:38/130 - (29%)
Similarity:58/130 - (44%) Gaps:24/130 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1148 DRMDLMSVMMVGPKRTPYQNALFFFDFQFGRDYPKSPPVCHYISYCTDRLNPNLYEGGRVCVSLL 1212
            |.|......::||..:|||..:||....|..|||..||   .:::.|...:||:...|.:|:.:|
Zfish    28 DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPP---KVAFTTRIYHPNINSNGSICLDIL 89

  Fly  1213 GTWMGRDNEVWSPSSTMLQVLVSIQGLIL---VDEPYYNEAG--YEKQRGTQLGNENSRVYNEMA 1272
                   ...|||:.|:.:||:||..|:.   .|:|...|..  |:..|         ..||.:|
Zfish    90 -------RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR---------EKYNRIA 138

  Fly  1273  1272
            Zfish   139  138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10254NP_651170.1 UQ_con 1126..1272 CDD:278603 37/128 (29%)
ube2d2NP_957253.1 UBCc 1..146 CDD:412187 38/130 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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