DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10254 and ube2o

DIOPT Version :9

Sequence 1:NP_651170.1 Gene:CG10254 / 42793 FlyBaseID:FBgn0027512 Length:1398 Species:Drosophila melanogaster
Sequence 2:XP_009290448.2 Gene:ube2o / 100331775 -ID:- Length:1305 Species:Danio rerio


Alignment Length:1554 Identity:397/1554 - (25%)
Similarity:601/1554 - (38%) Gaps:464/1554 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LAEAAPR--TP--TLANPPPSSQELGRTPNQESRHNANSHSRRSGGGQVPSKAQGNTESQFFLED 86
            :|:.||.  :|  :|::.||||                          ..|..:|.|:...|..|
Zfish     1 MAQFAPAALSPAVSLSSEPPSS--------------------------AFSPTEGGTQRLLFTHD 39

  Fly    87 GVFRIDRRGRVHFGLVTATTETYSSSEEEDVDS------------------------------LS 121
            .|.. ...|.:.||||..   .:...:.||.||                              |.
Zfish    40 LVSG-KHHGAMRFGLVRM---IHGEEDFEDSDSEIGGDGGGGGGGAPANSDNESGAAETRPWPLG 100

  Fly   122 RGEVRVAFYPGGKEMVMTEQSIGLADRTLMPGDVVRRRLPGENVLAGQAGYVRDVNVRADVMVMG 186
            ||.|||.:||.|.:..:.|..:.|.||:::|.|.|||....|.    |.|.|.::|....|.::|
Zfish   101 RGFVRVQWYPEGTKQDVRETKLKLEDRSIVPRDFVRRINSNEK----QCGIVTNINTECAVKLVG 161

  Fly   187 SRMVIKNVPAERLRPISEWN----QYVPLCMDTWIGTIIDINECAVLKSSNGARVEITSNDFHKF 247
            :...:..|.::.|:.|  |:    .|:  ..|.|:|.:.|::...|:|.|||||..::..|..|.
Zfish   162 TNCALYPVNSKDLQHI--WSYMYGDYI--VYDFWLGKVYDLSIQIVVKLSNGARCSMSEEDGAKL 222

  Fly   248 KDA---VSECDRTVFNPNVFFPGNIVIGRMPPPDRV-------KNLTPEITHPLTRKGRAVYTVE 302
            .|.   :|:......:...|:||.::||    |.:|       ..:.|    .|::|.:....||
Zfish   223 YDIYPHISDVGLFFDDAYGFYPGQVLIG----PAKVFANVQWLYGVKP----VLSKKSKFRVVVE 279

  Fly   303 SVETTSINVDWSCRAIGNATGSDDTDSDPLKEPRSLIKGEELHKVKRLSLYESYELQIHDR-FYL 366
            .|:...:.|.|..::.      ....||.:..|.|.|..|.|.:||||..::..:.|:.:| .|:
Zfish   280 EVQVVELKVTWITKSY------SPKGSDSVFPPPSTITQENLSRVKRLGYFDHTQRQLGERALYV 338

  Fly   367 KYSKCDLL-VKYADWENEQAEKYIPIFHAQKKMQRK---------ASKLNAS------ASTSGNA 415
            ..:|.:.. :.....|...|....|:....|:|.||         |..||.:      ..:.|..
Zfish   339 FPAKSETTRITCEGPEGTPAHHDDPVIRKLKRMFRKEAGKRVTENADTLNINLQPLEKKDSKGKE 403

  Fly   416 RSVPKFRRMPNKISGMR-LP-RPPSDQTHNACKSSKRSKEDV-------LTSEDEDEFEEFMQPL 471
            .||.:     ...||:. :| ...:|..||..:..|....|.       |...|.||     :|.
Zfish   404 ESVQE-----QDCSGINSIPCYSNNDPDHNYLEEGKEPSPDASQEQWAHLGDPDSDE-----EPG 458

  Fly   472 DQSMTAEKEVEVAEDALPPSAATTAAAGVEVQAPR-----ITMRSAKRRQVKKKIRSVKKTIYSP 531
            |.:          :|....:::.::.|.::....|     :::|:.||:..||:.:         
Zfish   459 DNT----------DDTSSVTSSASSTASLQSGPTRKKSIPLSIRNLKRKHKKKRTK--------- 504

  Fly   532 FNKKETTPKDGDEIVVETLVVYSSVTVVWQDGTVESGVHSTQLYPIHHLDNHEFFPGDFVT-KAN 595
            |:::.   |.||.:.||.:...:|..|:|:||.:|:|:.|..|.||.|||||||.|||:|. |..
Zfish   505 FSREF---KPGDRVAVEVVSTVTSADVMWKDGKIETGIRSNDLIPIQHLDNHEFCPGDYVVDKRP 566

  Fly   596 DISTGATDYGVIQCVDHDARIAKVMWFNIYTNIDNPIPLFKGLEELSVYDMKDHTDYQYRPGTVV 660
            .:......|||||..||.||...|.|..:....|: :.:....:::||||:.||.|:.:|...::
Zfish   567 QVLQDPAIYGVIQSGDHKARTCAVKWVKLNAAGDD-VEVIGEEDDVSVYDIADHPDFHFRTTDII 630

  Fly   661 IRVSNFTGEDVNS--TAGQVIDNYPNGRVRVWWAKGHITLCYPQDLFQPFEQDEQNEQDQDVYGS 723
            ||:.|...||..:  :.|||.....:.:|.|.||....|:..||.|:....:.|:...|.....|
Zfish   631 IRIGNSGTEDCGTERSVGQVCRVDLSSKVEVVWADNSKTIVLPQHLYNVESEIEETYYDSAEGSS 695

  Fly   724 DGS--------EDSWETESENSHISSSDNDDDILTGIDRATEAMKVLEKMFRVLHPNRKAEVLYD 780
            .|:        .|||||  :|..:......::.:: |..:|.|....||...:|           
Zfish   696 SGASSEEWEDESDSWET--DNGQVEEEPGGEETIS-ISSSTTATTSDEKTNGIL----------- 746

  Fly   781 LLDVYKNCRALDRLLNTKFFDEFNFKGIVRCKPITSKVCSDSATHERATPETPETSAAVPKESST 845
               .:|...:......|    |....|:                   ||||...|..|.|:....
Zfish   747 ---AFKTTDSTGTFSTT----ELAGGGV-------------------ATPEEKPTKEAPPRGFRE 785

  Fly   846 LQAELEPV--LMDPSVQ-----SSSSPTKRKSSTEMDEVLCKKSTDEISEEQDYQVEVVEVIEDP 903
            |:..|:.:  |.:.:|:     |.:|||...|:                                
Zfish   786 LKEALKILESLKNMTVEQLWTGSPTSPTAEPSA-------------------------------- 818

  Fly   904 PLVREYRCKYNEMFANARRSIAKAIENRTKNDSGVHSRGEITSDESNNHPDSENKLDIKHPT--I 966
                            |..:.|.|                                ||| ||  .
Zfish   819 ----------------ATAATASA--------------------------------DIK-PTKEK 834

  Fly   967 NVMDDLEIELVASGDADVCEVFCYLIKFQMARIRKTVAVTLGKTNDNPKQEKEDVSDAEEAIEAV 1031
            ..:||:                            |.:...|.||.||....:||      .:||.
Zfish   835 RFLDDI----------------------------KKLQENLKKTLDNVAIVEED------KMEAP 865

  Fly  1032 SQEAELANDGATECNTMAEDEAMEEPLNLNALSESLPAIDQTGPMACSSPSWSIIPDTPSVDENC 1096
            .:|..:.....||..|....|...:...|...|...|.:..|                 |.....
Zfish   866 VEEERIITPVLTEPQTPVRSEWPSDTPVLCQQSGGKPGVTFT-----------------SAKGEV 913

  Fly  1097 FQVLPNAPAAHNFISNLITPANKAQYQRAVQREYLMLKSSLPNGVVVRAYEDRMDLMSVMMVGPK 1161
            |.||...|..|:|......||...::...|::|..:|.:|||:|::|:.:||||||.|.::.||.
Zfish   914 FSVLEWVPDTHSFKKMEFQPAEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALIKGPH 978

  Fly  1162 RTPYQNALFFFDFQFGRDYPKSPPVCHYISYCTDRLNPNLYEGGRVCVSLLGTWMGRDNEVWSPS 1226
            ||||::.||.||.|....||..||:..|:|.|:.|||||||:.|:|||||||||:|:..|.|:..
Zfish   979 RTPYEDGLFLFDIQLPNIYPAVPPLFRYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWTSK 1043

  Fly  1227 STMLQVLVSIQGLILVDEPYYNEAGYEKQRGTQLGNENSRVYNEMAIIKIAQSTVKQLTNPPLIF 1291
            |::||||:||||||||:||||||||::..||.|.|.||||.|||||:||:.||..:.|..|..:|
Zfish  1044 SSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIKLVQSMTQLLQQPVEVF 1108

  Fly  1292 RNELIEHFKEFGTELYARMRAWSE-----------------------------YSLEAQRQNI-- 1325
            :.|:.|||...|..|..|:.:|.|                             |...:.:|:|  
Zfish  1109 QQEVYEHFACSGWRLVHRLESWLELDGAITDHAPRCGVGSLYAEPLEEIPSVLYHCSSSKQDIQV 1173

  Fly  1326 -------------------TKIKDMPVEYKASC----------ELPE------------------ 1343
                               |.:.:..:...:.|          |:||                  
Zfish  1174 EEDFEDSGLSLSTMATSGPTGLTEKDLSQNSECDSSLVGGAGSEIPEVPEVMSNFLGSQQSVKSC 1238

  Fly  1344 ------------------------------FPLLPCSRGFCIAVKRVLSQLQSELTALG 1372
                                          |||.|.|:||..::..||...::.|||.|
Zfish  1239 QESQPAVRPKKRRKSYRSFLPERSGYPDIGFPLFPLSKGFVKSMCVVLQHYRATLTAAG 1297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10254NP_651170.1 UQ_con 1126..1272 CDD:278603 85/145 (59%)
ube2oXP_009290448.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 192 1.000 Domainoid score I3173
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 374 1.000 Inparanoid score I2067
OMA 1 1.010 - - QHG60077
OrthoDB 1 1.010 - - D38527at33208
OrthoFinder 1 1.000 - - FOG0005714
OrthoInspector 1 1.000 - - oto38624
orthoMCL 1 0.900 - - OOG6_105055
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1047
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.970

Return to query results.
Submit another query.