DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10254 and ube2o

DIOPT Version :9

Sequence 1:NP_651170.1 Gene:CG10254 / 42793 FlyBaseID:FBgn0027512 Length:1398 Species:Drosophila melanogaster
Sequence 2:XP_031750084.1 Gene:ube2o / 100327234 XenbaseID:XB-GENE-877047 Length:1283 Species:Xenopus tropicalis


Alignment Length:1497 Identity:396/1497 - (26%)
Similarity:602/1497 - (40%) Gaps:415/1497 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SHSRRSGGGQVPSKAQGNTESQFF--LEDGVFRIDRRGRVHFGLVTATTETYSSSEEEDV----- 117
            |.|..|.....|....|:....|.  |..|.:    ||...|||| .......|.||||.     
 Frog     5 SDSAPSSASPGPPAGDGSQRLLFSHDLVSGCY----RGHTRFGLV-RLIHGEDSEEEEDALPGEE 64

  Fly   118 -----------------------------DSLSRGEVRVAFYPGGKEMVMTEQSIGLADRTLMPG 153
                                         ..|.||.|||.:||.|.:..:.|..:.|.||:|:|.
 Frog    65 ESGPGGRKKGAGGAAGGGSPGSEPPLSRFGPLKRGYVRVQWYPEGIKQDVRENKLKLEDRSLVPR 129

  Fly   154 DVVRRRLPGENVLAGQAGYVRDVNVRADVMVMGSRMVIKNVPAERLR---PISEWNQYVPLCMDT 215
            |||||.    .....|.|.|.|||:...|.|:|:...:..|.::.|.   ||. :..|:  ..|.
 Frog   130 DVVRRM----GTKDSQCGTVIDVNIDCVVKVVGTNCFLHPVNSKELHHIWPIM-YGDYI--AYDC 187

  Fly   216 WIGTIIDINECAVLKSSNGARVEITSNDFHKFKDAVSEC-DRTVF--NPNVFFPGNIVIGRMPPP 277
            |:|.:.|:....|||.|||||..:::.|..|..|..... |..:|  :...|:||.::||    |
 Frog   188 WLGKVYDLKNQVVLKLSNGARCSMSTEDASKLYDVCPHASDSGLFFDDSYGFYPGQVLIG----P 248

  Fly   278 DRV-------KNLTPEITHPLTRKGRAVYTVESVETTSINVDWSCRA--IGNATGSDDTDSDPLK 333
            .:|       ..:.|    .|:.|.:....||.|:.|.:.|.|..::  :|   |:|..|..|  
 Frog   249 SKVFSSVQWLSGVKP----VLSAKSKFRVGVEEVQVTELRVTWITKSFCLG---GTDSMDPPP-- 304

  Fly   334 EPRSLIKGEELHKVKRLSLYESYELQIHDR-FYLKYSK-------CDLLVKYADWENEQAEKYIP 390
               ::|..|.|.:||||..::..:.|:.:| .|:..:|       |:.|.|..........:.:.
 Frog   305 ---AVITQENLSRVKRLGSFDHTQRQLGERCLYIFPTKVEPTKILCESLEKNCLLGEVTVTRKVH 366

  Fly   391 IFHAQKKMQRKASKLNASASTSGNARSVPKFRRMPNKISGMRLPRPPSDQTHNACKSSKRSKEDV 455
            ....:|..:::..|:.:......|          |.::.......|||.:...|    :.::||:
 Frog   367 TQQVEKLREKQIVKIISCTQDPSN----------PTELLKKNSTVPPSYEIPTA----RATEEDL 417

  Fly   456 LTSEDEDE-------------------FEEFMQPLD-QSMTAEKEVEVAED-----ALPPSAATT 495
            ::::.|.|                   |.|..|.|. .|...:.:.|.|.|     ::..||::|
 Frog   418 VSAKLEGEPPEEPNVPECPTKEQPLGTFREIFQGLQLHSSEQDADDEAAGDTDETSSVTSSASST 482

  Fly   496 AA------AGVEVQAPRITMRSAKRRQVKKKIRSVKKTIYSPFNKKETTPKDGDEIVVETLVVYS 554
            |:      ||.:...| :::|:.||:..|||    |..:|..|       |.||.:.||.:...:
 Frog   483 ASSQSGSGAGRKKSIP-LSIRNLKRKHKKKK----KSKVYREF-------KHGDRVAVEVITTVT 535

  Fly   555 SVTVVWQDGTVESGVHSTQLYPIHHLDNHEFFPGDFVT-KANDISTGATDYGVIQCVDHDARIAK 618
            :..|:||||:||:.:.|.:|.||.||||:||.|||||. |....:...:.|||:|..||..|...
 Frog   536 TADVMWQDGSVETNIRSNELVPIQHLDNNEFCPGDFVVDKRAHAAQDPSIYGVVQSGDHTGRTCV 600

  Fly   619 VMWFNIYTNIDNPIPLFKGLEELSVYDMKDHTDYQYRPGTVVIRVSNFTGE---DVNS-TAGQVI 679
            |.|..:..|.|: ..|....|::||||:.||.|:::|...:|||:.|...|   |.:. :.|||.
 Frog   601 VKWIKLNLNGDD-TELVGEEEDVSVYDIVDHPDFRFRATDIVIRIGNSDPEAFPDASQPSVGQVA 664

  Fly   680 DNYPNGRVRVWWAKGHITLCYPQDLFQPFEQDEQNEQDQ-DVYGSDGSEDSWETESENSHISSSD 743
            ....:.:|.|.||....|:..||.|:....:.|::..|. |...|..|.|.||.||::....:..
 Frog   665 RVDVSSKVEVIWADNSRTIVLPQHLYNVESELEESFYDSVDSSSSGASSDEWEDESDSWETDNGL 729

  Fly   744 NDDDILTGIDRATEAMKVLEKMFRVLHPNRKAEVLYDLLDVYKNCRALDRLLNTKFFDEFNFKGI 808
            .:|:|                      |.                                    
 Frog   730 TEDEI----------------------PR------------------------------------ 736

  Fly   809 VRCKPITSKVCSDSATHERATPETPETSAAVPKESSTLQAELEPVLMDPSVQSSSSPTKRKSSTE 873
                         :|..|.|.....||:.|.|.:        ||. .|.:.||::          
 Frog   737 -------------AAGGEEAAASQNETAPAEPMQ--------EPA-QDEAEQSAA---------- 769

  Fly   874 MDEVLCKKSTDEISEEQDYQVEVVEVIEDPPLVREYRCKYNEMFANARRSIAKAIENRTKNDSGV 938
                        ::...|..|..|:|.|...:|:.:: :..|..     .|.::::|.|....  
 Frog   770 ------------LAAAADLGVLGVKVNEKEGIVKSFK-ELKEAI-----KILESLKNMTVEQL-- 814

  Fly   939 HSRGEITSDESNNHPDSENKLDIKHPTINVMDDLEIELVASGDADVCEVFCYLIKFQMARIRKTV 1003
             ..|..||..:.....:..|        ..:||::                              
 Frog   815 -LTGSPTSPTAEPEKFTREK--------KFLDDIK------------------------------ 840

  Fly  1004 AVTLGKTNDNPKQEKEDVSDAEEAIEAVSQEAELANDGATECNTMAEDEAMEEPLNLNALSESLP 1068
                 |..:|.|:..::|:.|||  |.:....|...:...|..|....|...:...|...|...|
 Frog   841 -----KLQENLKKTLDNVAIAEE--EKMESAPETEKEEKAEAQTPVRSEWPSDTPVLCQQSGGKP 898

  Fly  1069 AIDQTGPMACSSPSWSIIPDTPSVDENCFQVLP-NAPAAHNFISNLITPANKAQYQRAVQREYLM 1132
            .:..|   :.....:|::...|  :...|:.|. .||.|..|.|             .|::|..:
 Frog   899 GVIFT---SAKGEVFSVLETAP--ESQAFKKLEFQAPEAKKFFS-------------TVRKEMAL 945

  Fly  1133 LKSSLPNGVVVRAYEDRMDLMSVMMVGPKRTPYQNALFFFDFQFGRDYPKSPPVCHYISYCTDRL 1197
            |.:|||:|::|:.:||||||.|.::.||.||||::.||.||.|....||..||:..|:|.|:.:|
 Frog   946 LATSLPDGIMVKTFEDRMDLFSALIKGPTRTPYEDGLFLFDMQLPNIYPAVPPLFRYLSQCSGKL 1010

  Fly  1198 NPNLYEGGRVCVSLLGTWMGRDNEVWSPSSTMLQVLVSIQGLILVDEPYYNEAGYEKQRGTQLGN 1262
            |||||:.|:|||||||||:|:..|.|:..|::||||:||||||||:||||||||::..||.|.|.
 Frog  1011 NPNLYDNGKVCVSLLGTWIGKGTERWTSKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGY 1075

  Fly  1263 ENSRVYNEMAIIKIAQSTVKQLTNPPLIFRNELIEHFKEFGTELYARMRAWSE------------ 1315
            ||||.|||||:|::.||..:.|..|..:|:.|:.|||:..|..|..|:..|.|            
 Frog  1076 ENSRCYNEMALIRVVQSMTQMLRRPVEVFQQEIREHFQSSGWRLAHRIENWLETNSMVERGGEHR 1140

  Fly  1316 ----------YS-------------------------------------LEAQRQNIT---KIKD 1330
                      ||                                     ||:..:..|   .:.|
 Frog  1141 NGQEHPCIVPYSPTEPECTPEPTLDSKDLDDSGCGASTMSPGESQQFSDLESTSKGATGGASLSD 1205

  Fly  1331 MP-----------------VEYKASCELPE--------FPLLPCSRGFCIAVKRVLSQLQSELTA 1370
            .|                 ..|::.  ||:        |||.|.|:||..:::.||:|.::.|..
 Frog  1206 EPRGAAGGGQPSVKPKKRRKSYRSF--LPDKRGYPDIGFPLFPLSKGFIKSIQGVLAQFKASLLE 1268

  Fly  1371 LG 1372
            .|
 Frog  1269 AG 1270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10254NP_651170.1 UQ_con 1126..1272 CDD:278603 84/145 (58%)
ube2oXP_031750084.1 UBCc 939..1089 CDD:238117 87/149 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2916
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 435 1.000 Inparanoid score I1659
OMA 1 1.010 - - QHG60077
OrthoDB 1 1.010 - - D38527at33208
OrthoFinder 1 1.000 - - FOG0005714
OrthoInspector 1 1.000 - - oto102498
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1047
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.980

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