DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPE and CG34171

DIOPT Version :10

Sequence 1:NP_651168.1 Gene:SPE / 42791 FlyBaseID:FBgn0039102 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001097175.2 Gene:CG34171 / 5740474 FlyBaseID:FBgn0085200 Length:292 Species:Drosophila melanogaster


Alignment Length:234 Identity:55/234 - (23%)
Similarity:89/234 - (38%) Gaps:59/234 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 CGGALLNSRYVLTAGHCLASRELDKSGAVLHSVRLGEWDTRTDPDCTTQMNGQRICA-------P 223
            |.|.:|.:|:|||:.||:.    ||:|.::...|:                ...:||       .
  Fly    57 CTGVILTNRHVLTSAHCIT----DKNGVMMSPKRI----------------VVALCASLFKTPES 101

  Fly   224 KHIDIEVEKGIIHEMYAPNSVDQRNDIALVRLKRIVSYT-DYVRPICLPTDGLVQNNFVD----- 282
            :...:::...|||..|..|   |.||||:::|||.|... .::.|:.|....|...|...     
  Fly   102 EEFVVDIHNMIIHPYYHRN---QHNDIAIIKLKRYVKLDGHHLAPVVLGNSSLEVGNDCKTIGGI 163

  Fly   283 YGMDVAGWGLTENMQPSAIKLKITVNVWNLTSCQEKYSSFK-----------VKLDDSQMCA--- 333
            :|:....:|...:|      |.:.|.:.....|.:...|..           ||..:.|||.   
  Fly   164 FGVRRQRFGSFHSM------LLVNVELRPFDECLKVKKSLMAARPENEDLICVKSTEKQMCTTDF 222

  Fly   334 GGQLGVDTCGGDSGGPLMVPISTGGRDVFYIAGVTSYGT 372
            ||.|   .|.|...|..:..|:....|..:.:.|:.|.:
  Fly   223 GGPL---FCDGQLYGIALGSINCSSPDPVFFSDVSFYNS 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPENP_651168.1 CLIP 36..94 CDD:463440
Tryp_SPc 135..397 CDD:238113 55/234 (24%)
CG34171NP_001097175.2 Tryp_SPc 38..263 CDD:473915 55/234 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.