DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPE and CG17477

DIOPT Version :10

Sequence 1:NP_651168.1 Gene:SPE / 42791 FlyBaseID:FBgn0039102 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster


Alignment Length:278 Identity:67/278 - (24%)
Similarity:114/278 - (41%) Gaps:50/278 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 CGFLFADR-IFGGTNTTLWEFPWMVLLQYKKLFSETYTFNCGGALLNSRYVLTAGHCLASRELDK 190
            |..|..:. |.||.|....:.|:.|.|| ..|.|..    ||||:::.|:::|||||:......:
  Fly    18 CDLLALEHFIVGGQNAAEGDAPYQVSLQ-TLLGSHL----CGGAIISDRWIITAGHCVKGYPTSR 77

  Fly   191 SGAVLHSVRLGEWDTRTDPDCTTQMNGQRICAPKHIDIEVEKGIIHEMYAPNSVDQRNDIALVRL 255
            ......::|..|......||..                     .:|..|  :|...:|||.|:.|
  Fly    78 LQVATGTIRYAEPGAVYYPDAI---------------------YLHCNY--DSPKYQNDIGLLHL 119

  Fly   256 KRIVSYTDYVRPICLPTD----GLVQNNFVDYGMDVAGWGLTENMQPSAIKLKITVNVWNLTSCQ 316
            ...:::....:.:.|||.    |..:..|..:|...|...|...:|      ::.....|..:|:
  Fly   120 NESITFNALTQAVELPTSPFPRGASELVFTGWGSQSAAGSLPSQLQ------RVQQQHLNSPACE 178

  Fly   317 EKYSSFK-VKLDDSQMCAGGQLGVDTCGGDSGGPLMVPISTGGRDVFYIAGVTSYGTKPCGLKGW 380
            ...|::: ::|....:||..|..:..|.|||||||:...:..|...|::         ||. :|.
  Fly   179 SMMSAYEDLELGPCHICAYRQANIGACHGDSGGPLVHQGTLVGILNFFV---------PCA-QGV 233

  Fly   381 PGVYTRTGAFIDWIKQKL 398
            |.::.....:.||::|.:
  Fly   234 PDIFMNIMYYRDWMRQTM 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPENP_651168.1 CLIP 36..94 CDD:463440
Tryp_SPc 135..397 CDD:238113 64/266 (24%)
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 64/266 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.