DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPE and CG18180

DIOPT Version :10

Sequence 1:NP_651168.1 Gene:SPE / 42791 FlyBaseID:FBgn0039102 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_648341.1 Gene:CG18180 / 39125 FlyBaseID:FBgn0036024 Length:264 Species:Drosophila melanogaster


Alignment Length:276 Identity:65/276 - (23%)
Similarity:106/276 - (38%) Gaps:63/276 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 RIFGGTNTTLWEFPWMVLLQYKKLFSETYTFNCG----GALLNSRYVLTAGHCLASRELD----- 189
            ||..|......:.|::|     .||..|...|.|    |.::.:.::|||.|||....::     
  Fly    35 RIVNGYPAPEGKAPYIV-----GLFIRTDGSNSGAVGAGTIIANDWILTAAHCLTGDYVEIHYGS 94

  Fly   190 ---KSGAVLHSVRLGEWDTRTDPDCTTQMNGQRICAPKHIDIEVEKGIIHEMYAPNSVDQRNDIA 251
               .:||...:||...:.:.  ||..:|  |.|                             ||.
  Fly    95 NWGWNGAYRQTVRRDNFISH--PDWPSQ--GGR-----------------------------DIG 126

  Fly   252 LVRLKRIVSYTDYVRPICLPTDGLVQNNFVDYGMDVAGWGLTENMQPSAIKLKITVNVWNLTSCQ 316
            |:|... |.:...:..|.||:.....:.:.|......|||..:|...:.....:.|.:.:.:.|:
  Fly   127 LIRTPH-VDFNGLINKIPLPSMNEQNDRYQDTWCVACGWGGMDNGNLADWLQCVDVQIISNSECE 190

  Fly   317 EKYSSFKVKLDDSQMCAGGQLGVDTCGGDSGGPLMVPISTGGRDVFYIAGVTSYGTKPCGLKGWP 381
            :.|.|    :..:.||.....|...|||||||||:.      .|...:.||.::.:..|  ...|
  Fly   191 QAYGS----VASTDMCTRHADGKSVCGGDSGGPLVT------HDNARLVGVITFASVSC--HDGP 243

  Fly   382 GVYTRTGAFIDWIKQK 397
            ..|||...:::||:.:
  Fly   244 SGYTRVSDYLEWIRDQ 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPENP_651168.1 CLIP 36..94 CDD:463440
Tryp_SPc 135..397 CDD:238113 64/273 (23%)
CG18180NP_648341.1 Tryp_SPc 36..259 CDD:238113 64/273 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.