DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPE and CG18420

DIOPT Version :9

Sequence 1:NP_651168.1 Gene:SPE / 42791 FlyBaseID:FBgn0039102 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:319 Identity:90/319 - (28%)
Similarity:138/319 - (43%) Gaps:62/319 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VEGLVNRILVCCPQSMRGN--IMDSEPTPSTRDALQQGDVLPGNDVCGFLFADRIFGGTNTTLWE 145
            |.|:.:.:|:.....:.|:  .:|||  ..||..|:.|              .||..|.......
  Fly     5 VIGMASILLLLTVFPLLGSTQFLDSE--CGTRSPLKLG--------------PRIVNGKVAVRNS 53

  Fly   146 FPWMVLLQYKKLFSETYTFNCGGALLNSRYVLTAGHCLASRELDKSGAVLHSVRLGEWDTRTDPD 210
            .|||..|.     :.:..|.|||.|::.|.||||.||.    :..:..|   |||||::.:    
  Fly    54 SPWMAFLH-----TSSNQFICGGTLISRRLVLTAAHCF----IPNTTIV---VRLGEYNRK---- 102

  Fly   211 CTTQMNGQRICAPKHIDIEVEKGIIHEMYAPNSVDQRNDIALVRLKRIVSYTDYVRPICLPTDGL 275
                :.|.|   .:|   :|.:...|..|.||:  ..|||||:||...|.|...:||||:..|..
  Fly   103 ----LKGYR---EEH---QVNRTFQHRFYDPNT--HANDIALLRLVSNVVYKANIRPICIMWDAS 155

  Fly   276 VQNNFVDYG-MDVAGWGLTENMQPSAIKLKITVNVWNLTSCQEKYSSFKVKLDDSQMCAGGQLGV 339
            .:::..... :...|||.||:|..|:     .:...:::....|..:|...| .:|.|| |....
  Fly   156 WKHHIDSIKVLTGTGWGRTESMHDSS-----ELRTLDISRQPSKMCAFGSVL-SNQFCA-GNWNS 213

  Fly   340 DTCGGDSGGPL--MVPISTGGRDVFYIAGVTSYGTKPCGLKGWPGVYTRTGAFIDWIKQ 396
            :.|.||:|||:  ||......|.|.....:|:   |.|..   |.|:|...:.|::|::
  Fly   214 NLCIGDTGGPVGAMVRYRNAFRFVQVGIAITN---KRCQR---PSVFTDVMSHIEFIRR 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPENP_651168.1 CLIP 42..94 CDD:314844 3/10 (30%)
Tryp_SPc 135..397 CDD:238113 78/265 (29%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 78/262 (30%)
Tryp_SPc 43..267 CDD:238113 78/265 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463617
Domainoid 1 1.000 102 1.000 Domainoid score I4289
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S12390
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.890

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