Protein Alignment CG16710 and scaf

DIOPT Version :10

• Sequence 1: NP_651167.3
• Gene: CG16710 / 42790
• FlyBaseID: FBgn0039101
• Length: 372
• Species: Drosophila melanogaster
• Sequence 2: NP_610180.1
• Gene: scaf / 35505
• FlyBaseID: FBgn0033033
• Length: 655
• Species: Drosophila melanogaster
• Alignment Length: 376
• Identity: 93/376 - (24%)
• Similarity: 152/376 - (40%)
• Gaps: 112/376 - (29%)

  Fly    29 PCNLDE---KCISLARCTSLLPFLKPHNM---------TPAEKAVFEDRY------C---GYGPK 72
            |.|:.:   ||.|...|||       .|.         ||.|.:..|..:      |   ..|..
  Fly   334 PANVPKHFAKCASALVCTS-------ENFCNAIGVLSETPVELSPMEAAFRVPLTDCLQTENGSP 391

  Fly    73 GQELLDRVLICCPNMGHILP----NTQICGPIMPAYRIFGGEETQPN--ELPWMALILYAHRSRS 131
            |:        ||.:..::.|    ...:|.......:..|.::...|  |:||.|:||   |..|
  Fly   392 GK--------CCRDPNYVDPWPVNLAGVCATRNKRTKPTGVKDLDANFAEIPWQAMIL---RESS 445

  Fly   132 VWNERLVSRCAGSLITNRYVLTAAHCLRITGLDLR--RVRLGEHNILS-NPDCVTHINGREHCAP 193
               :.|:  |.|::|.:::||::|.|  :.||.:.  ||:.||..:.| |......:.|.:
  Fly   446 ---KTLI--CGGAIIGDQFVLSSASC--VNGLPVTDIRVKAGEWELGSTNEPLPFQLTGVK---- 499

  Fly   194 EHLEIDVDLSIKHRHYMVFEERPYNDIALLRLKFPVRYTAQIKPICVQLDYIFSNPSFSNHKLQI 258
               .:||     |..|  ......:|:|::||:..:.:.:.|:|||:..:    :|. .:.:...
  Fly   500 ---TVDV-----HPDY--DPSTNSHDLAIIRLERRLEFASHIQPICISDE----DPK-DSEQCFT 549

  Fly   259 AGWG---LS-HKQG----YSNVLLQAYVNGRNADECSLSEPSLGLDKETHICAGNLGGNDTCKGD 315
            :|||   || |::|    .::.|.||      ..|||....|        :|:..  ..|:|:.|
  Fly   550 SGWGKQALSIHEEGALMHVTDTLPQA------RSECSADSSS--------VCSAT--KFDSCQFD 598

  Fly   316 SGGPLMAIMERGDEEFVYLAGITSYGYSQCGYGPAAYTKTSKF----VEWI 362
            .|..|..    |....|.|.||.: |.:.||.|     :|.:|    ::||
  Fly   599 VGSALAC----GSGSSVRLKGIFA-GENSCGEG-----QTVRFAKPDIKWI 639

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG16710	NP_651167.3	CLIP	36..84	CDD:463440	13/65 (20%)
		Tryp_SPc	105..362	CDD:214473	71/273 (26%)
scaf	NP_610180.1	Atrophin-1	<63..>338	CDD:460830	2/3 (67%)
		CLIP_SPH_Scar	343..408	CDD:465747	17/79 (22%)
		Tryp_SPc	428..616	CDD:238113	62/236 (26%)