DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16710 and psh

DIOPT Version :10

Sequence 1:NP_651167.3 Gene:CG16710 / 42790 FlyBaseID:FBgn0039101 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:428 Identity:119/428 - (27%)
Similarity:169/428 - (39%) Gaps:120/428 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVLHTQLLMYLAESEYPPCNLDEKCISLARCTSLLPFLKPHNMTPAEKAVFEDRY---------- 66
            |:|.|.:|:        .|:..|..:::.|...:...:.....|.::.....|.|          
  Fly     7 LLLGTFVLI--------SCSSVEAAVTVGRACKVTDTMPGICRTSSDCEPLIDGYIKSGVLTLND 63

  Fly    67 ---CGYGPKGQELLDRVLICCP-------------------------NMGHI---------LPNT 94
               ||.|..|:      :.|||                         ..|.:         .|..
  Fly    64 VPSCGLGAWGE------IFCCPTKPCCDNSTITSVSTSSTTSTKAPMTSGRVDVPTFGSGDRPAV 122

  Fly    95 QICGPIMP----------AYRIFGGEETQPNELPWMALILYAHRSRSVWNERLVSRCAGSLITNR 149
            ..|..|..          ...|.||....|...|.||.|.|.......       ||.||||.:|
  Fly   123 AACKKIRERKQQRSGNQLVIHIVGGYPVDPGVYPHMAAIGYITFGTDF-------RCGGSLIASR 180

  Fly   150 YVLTAAHCLRITGLDLRRVRLGEHNILSNPDCVTHINGREHCAPEHLEIDVDL-SIK-HRHYMVF 212
            :|||||||:.........||||..|| .|||              |...|:.: |:| |..|:  
  Fly   181 FVLTAAHCVNTDANTPAFVRLGAVNI-ENPD--------------HSYQDIVIRSVKIHPQYV-- 228

  Fly   213 EERPYNDIALLRLKFPVRYTAQIKPICVQLDYIFSNPSFSNHKLQIAGWGLSH--KQGYSNVLLQ 275
             ...|||||:|.|:..|..|..|:|.|:..|  .::|. ||.|..:||||:.:  .:..|.:||:
  Fly   229 -GNKYNDIAILELERDVVETDNIRPACLHTD--ATDPP-SNSKFFVAGWGVLNVTTRARSKILLR 289

  Fly   276 AYVNGRNADECSLS---EP-SLGLDK----ETHICA--GNLGGNDTCKGDSGGPLMAIMERGDEE 330
            |.:.....|:|::|   :| |:.|.|    ::.:||  ..|.. |.|||||||||  |.|...|:
  Fly   290 AGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIA-DACKGDSGGPL--IHELNVED 351

  Fly   331 FVY-LAGITSYGYSQCGYGPAAYTKTSK---FVEWILW 364
            .:| :.|:.|.|:......|..||:.|.   |:|.|:|
  Fly   352 GMYTIMGVISSGFGCATVTPGLYTRVSSYLDFIEGIVW 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16710NP_651167.3 CLIP 36..84 CDD:463440 8/60 (13%)
Tryp_SPc 105..362 CDD:214473 96/274 (35%)
pshNP_573297.1 CLIP 30..79 CDD:197829 8/54 (15%)
Tryp_SPc 144..387 CDD:238113 96/273 (35%)

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