DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16710 and sphinx1

DIOPT Version :10

Sequence 1:NP_651167.3 Gene:CG16710 / 42790 FlyBaseID:FBgn0039101 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_729255.2 Gene:sphinx1 / 318005 FlyBaseID:FBgn0052383 Length:253 Species:Drosophila melanogaster


Alignment Length:278 Identity:56/278 - (20%)
Similarity:102/278 - (36%) Gaps:77/278 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 RIFGGEETQPNELPWMALILYAHRSRSVWNERLVSRCAGSLITNRYVLTAAHCLRITGLDL---- 165
            ||.||...:...:.::..|:|.....|..|..     ||::|:|:::||....|:.:.:::    
  Fly    25 RIAGGYRAKTFTIIYLVGIVYFKSQTSSLNYG-----AGTIISNQWILTVKTVLKYSYIEVHLAS 84

  Fly   166 RR-------VRLGEHNILSNPDCVTHINGREHCAPEHLEIDVDLSIKHRHYMVFEERPYNDIALL 223
            ||       :|:.:.|.            |.|...:|:     :::....|..|:.|      :.
  Fly    85 RRSYRGFDIIRIYKENF------------RFHYDNDHV-----IALVKCPYQKFDRR------MD 126

  Fly   224 RLKFPV------RYTAQIKPICVQLDYIFSNPSFSNHKLQIAGWGLSHKQGYSNVLLQAY-VNGR 281
            |::.|.      ||...:..:|                    |:|...:.......::.. |...
  Fly   127 RVRVPAYDTRFERYVGNMTMVC--------------------GYGTEKRHAKLPEWMRCIEVEVM 171

  Fly   282 NADECSLSEPSLGLDKETHICAGNLGGNDTCKGDSGGPLMAIMERG-DEEFVYLAGITSYGYSQC 345
            |..||:.....|   |...:|....|....|:||.||   |::..| :..|:   ||.......|
  Fly   172 NNTECAKYYTPL---KWYEMCTSGEGFKGVCEGDIGG---AVVTMGPNPTFI---GIIWLMPENC 227

  Fly   346 GYG-PAAYTKTSKFVEWI 362
            ..| |:.:.:.|..::||
  Fly   228 SIGYPSVHIRVSDHIKWI 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16710NP_651167.3 CLIP 36..84 CDD:463440
Tryp_SPc 105..362 CDD:214473 54/276 (20%)
sphinx1NP_729255.2 Tryp_SPc 25..245 CDD:473915 54/276 (20%)
Blue background indicates that the domain is not in the aligned region.

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