DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3d1 and EIF3D

DIOPT Version :9

Sequence 1:NP_524463.2 Gene:eIF3d1 / 42789 FlyBaseID:FBgn0040227 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_003744.1 Gene:EIF3D / 8664 HGNCID:3278 Length:548 Species:Homo sapiens


Alignment Length:540 Identity:314/540 - (58%)
Similarity:402/540 - (74%) Gaps:9/540 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FEKPTVQFNEKGWGPCELPDTFKDVPYQPFSKNDRLGKICDWTNTSNNDKKYQNKYASSFGTGIQ 78
            |..|.:|.|..|||||.:|:.|:|:|||||||.|||||:.|||..:..||:|.|||:|.||.|.|
Human     4 FMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQFGGGSQ 68

  Fly    79 YSYYHEEDETTFHLVDTARVQKPPHQRGRFR-NMRNSRSGRGRNARGGLNTHGMTTLSGKNVKAR 142
            |:|:|||||::|.||||||.||..:||.|.| ..||.|..:.|......|.. :...|.|..:..
Human    69 YAYFHEEDESSFQLVDTARTQKTAYQRNRMRFAQRNLRRDKDRRNMLQFNLQ-ILPKSAKQKERE 132

  Fly   143 DPRHGRGMGKKFGHR----GPPPKMRESSVAVRADWASIEEMDFPRLIKLSLPNIKEGVDIVTCG 203
            ..|..:...|:||.|    ....|.|:|||.||:||...||||||:|:|:....:.|..||..||
Human   133 RIRLQKKFQKQFGVRQKWDQKSQKPRDSSVEVRSDWEVKEEMDFPQLMKMRYLEVSEPQDIECCG 197

  Fly   204 TLEYYDKTYDRINVKNEKPLQKIDRIVHTVTTTDDPVIRRLSKTVGNVFATDAILATIMCSTRSN 268
            .||||||.:|||..::||||:.|.||.||||||||||||:|:||.||||||||||||:|..|||.
Human   198 ALEYYDKAFDRITTRSEKPLRSIKRIFHTVTTTDDPVIRKLAKTQGNVFATDAILATLMSCTRSV 262

  Fly   269 YSWDIVIEKVGDKVFMDKRDHTEFDLLTVNESSVEPPTDDDSSCNSPRNLAIEATFINHNFSQQV 333
            ||||||:::||.|:|.||||:::||||||:|::.|||.|:.:|.|||||||:|||:||||||||.
Human   263 YSWDIVVQRVGSKLFFDKRDNSDFDLLTVSETANEPPQDEGNSFNSPRNLAMEATYINHNFSQQC 327

  Fly   334 LKTGDQEPKYKFEESNPFISEDED-IQVASVGYRYKKWELGSDIVLVARCEHDGVLQTPSGEPQF 397
            |:.|.:  :|.|...|||:.:|.| .::|||.|||::|:||.||.|:.|||||||:...:||..|
Human   328 LRMGKE--RYNFPNPNPFVEDDMDKNEIASVAYRYRRWKLGDDIDLIVRCEHDGVMTGANGEVSF 390

  Fly   398 MTIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRI 462
            :.||.||||||:..|||:||||||:|||||:|.||:||:.|||:||..|:||||:.||||||||.
Human   391 INIKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRY 455

  Fly   463 NPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLY 527
            :.:|.|||||||||||||:|||:|||||::||||||||:||:.||.::|||||:|||||.:||:|
Human   456 HVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVY 520

  Fly   528 DIPDNTFDSDDSDDGEGDDE 547
            .:||.||.||:.::.|.::|
Human   521 SLPDGTFSSDEDEEEEEEEE 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3d1NP_524463.2 eIF-3_zeta 14..528 CDD:282888 305/519 (59%)
EIF3DNP_003744.1 eIF-3_zeta 4..521 CDD:398661 305/519 (59%)
RNA gate. /evidence=ECO:0000250|UniProtKB:K7IM66 285..299 8/13 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..548 8/18 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159615
Domainoid 1 1.000 622 1.000 Domainoid score I176
eggNOG 1 0.900 - - E1_KOG2479
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2782
Inparanoid 1 1.050 642 1.000 Inparanoid score I810
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53861
OrthoDB 1 1.010 - - D1030308at2759
OrthoFinder 1 1.000 - - FOG0004086
OrthoInspector 1 1.000 - - otm41053
orthoMCL 1 0.900 - - OOG6_102252
Panther 1 1.100 - - LDO PTHR12399
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R379
SonicParanoid 1 1.000 - - X2834
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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