DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GILT3 and ifi30a

DIOPT Version :10

Sequence 1:NP_651165.1 Gene:GILT3 / 42787 FlyBaseID:FBgn0039098 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_001006057.1 Gene:ifi30a / 336503 ZFINID:ZDB-GENE-030131-8447 Length:255 Species:Danio rerio


Alignment Length:186 Identity:47/186 - (25%)
Similarity:73/186 - (39%) Gaps:67/186 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IFGLLFTLCLLLV-----------------WPTPGNGQSPDE--------------------SRL 31
            :||  |.||::||                 :| |....|.::                    .::
Zfish     1 MFG--FNLCVVLVAVFSLSKCSARFVYSCKYP-PSQWCSSEDIAAECGVLEQCMKYNSTKAADKV 62

  Fly    32 LVAIHYEALCPDSMSFIRRRLYDA---LQDNDWWSVTDLKLYPFGKAGFYNNTSTGESQVF-CQH 92
            .|:::||:|||....|:..:|...   |||     :.::.|.|:|.|   ..|......:| |||
Zfish    63 KVSLYYESLCPGCRMFLTSQLVPTLIMLQD-----IMEIDLVPYGNA---QETQAQGKYIFTCQH 119

  Fly    93 GVDECELNALHACIIETLDIRKAFNLIYCMLRSYSNELGPCSRSMGVDVSK-AREC 147
            |.|||..|.:..|::..|.: .|..:|:||             ..|.||.| |:.|
Zfish   120 GEDECLGNMIETCMLNKLGL-DAVMVIFCM-------------ESGNDVLKSAQPC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GILT3NP_651165.1 GILT 34..127 CDD:460853 30/96 (31%)
ifi30aNP_001006057.1 SapA 27..53 CDD:470592 3/26 (12%)
GILT 65..162 CDD:460853 36/119 (30%)

Return to query results.
Submit another query.