DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31145 and Fam20b

DIOPT Version :10

Sequence 1:NP_001356923.1 Gene:CG31145 / 42784 FlyBaseID:FBgn0051145 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_001100657.1 Gene:Fam20b / 304885 RGDID:1311162 Length:409 Species:Rattus norvegicus


Alignment Length:334 Identity:140/334 - (41%)
Similarity:197/334 - (58%) Gaps:22/334 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   636 ITKKELYGEQDTLVDAVLRDMIKLPIQHVVQKEGGTQLKLIIEYPNDIKALMKPMRFPREQ--QT 698
            :..:|:|.|:...:.||:..|....|........|||||.::......|.:.||.|:.|:.  :.
  Rat    71 VVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLTLEGGQKVVFKPKRYSRDYVVEG 135

  Fly   699 LPNHFYFTDYERHNAEIAAFHLDRILGFRRAMPVAGRTLNITTEIYQLAEENLLKTFFVSPSLNL 763
            .|    :..|:|||||:||||||||||||||..|.||.:|:.||:..:|.|.||.| |::...|.
  Rat   136 EP----YAGYDRHNAEVAAFHLDRILGFRRAPLVVGRYVNLRTEVKPVATEQLLST-FLTVGNNT 195

  Fly   764 CFHGKCSYYCDTSHAICGNPDMLEGSFAAFLPNFESGNRKLW-----RHPWRRSYHKRKKAQWET 823
            ||:||| |||..:...|.:.||:|||...:||:       :|     ||||.|:|.:.|.|:||.
  Rat   196 CFYGKC-YYCRETEPACADGDMMEGSITLWLPD-------VWPLQKHRHPWGRTYREGKLARWEY 252

  Fly   824 DANYCALVRDIPPYDDGRRLYDLMDMAVFDFLTGNMDRHHYETFKVYGNETFPLHLDHGRGFGRP 888
            |.:||..|:...|||.|.||.|::|.||||:|.||.||||||:|:.....:..:.||:.:.||.|
  Rat   253 DESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNP 317

  Fly   889 FHDELSILAPVLQCCLIRKSTLVKLLDFHNGPKPLSQLMSESLSQDPVSPVLWQPHLEALDRRTG 953
            ..||.|||||:.|||:||.||..:|....||  .|...:..:::.||::|||..|||:.:|:|..
  Rat   318 SLDERSILAPLYQCCIIRVSTWNRLNYLKNG--VLKSALKSAMAHDPIAPVLSDPHLDTVDQRLL 380

  Fly   954 IILQSIRDC 962
            .:|.:|:.|
  Rat   381 NVLATIKQC 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31145NP_001356923.1 Fam20C 755..971 CDD:461992 91/213 (43%)
Fam20bNP_001100657.1 FAM20B_C 188..394 CDD:198461 91/212 (43%)

Return to query results.
Submit another query.