DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10182 and rhy-1

DIOPT Version :10

Sequence 1:NP_651158.1 Gene:CG10182 / 42780 FlyBaseID:FBgn0039091 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_495954.1 Gene:rhy-1 / 174455 WormBaseID:WBGene00012324 Length:502 Species:Caenorhabditis elegans


Alignment Length:542 Identity:133/542 - (24%)
Similarity:235/542 - (43%) Gaps:96/542 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 ASCSATYMNTFMGMVTKQLLNVSIPSSVMSISESSCQTSESVPWDGLTIFMIVILSVMGSLVALF 226
            :|...|:....|..:::..|..|..:||::.:.|||.|:..:| |.:.:....:|:.| :||.:.
 Worm     2 SSSPHTHTLIIMERLSEVRLYSSPMTSVLNSNLSSCLTNAFIP-DTVRMASSPLLAWM-TLVVIG 64

  Fly   227 TLWDYCLGKNQDQLPTIVKVFSARVNSRALFRIVEVNSSPNVIDCLHGIRCLSLMWVVFCHQ--- 288
            ||             ..|.|||.....|::..::...||.  :|.|...|.::::||:..|.   
 Worm    65 TL-------------APVSVFSCLSLKRSVKELLTERSSK--LDVLDIFRFVAILWVMLNHTGSE 114

  Fly   289 ---YVMAALASNINIFHAISWEETPYASFILHGFFSVDSFFVLGGLLVALIPLRMMDRTKGKLNV 350
               .::..|.| .:.|.:...:...:.:.:.:....|:.|.||.|||.|...||..|..      
 Worm   115 GRIDILDRLPS-ADAFKSAMHDHPIFGALMGNSALGVEIFLVLSGLLAARSWLRKADEP------ 172

  Fly   351 PLMYLH-------RLIRIVPLLAIAIVMYLKLMPIV-ADGPRFGSGYSGTVDCENGWYWTLL--- 404
              .:.|       ||:|:.|  ::.|.:|:...||: |..||:.|.......     :|.:|   
 Worm   173 --FFQHWKSFIARRLLRLAP--SMFIFVYIAAGPIMNALLPRYSSSMVSACG-----FWGILSHV 228

  Fly   405 -FVNNY-TEEKCLGHTWYLSVDMQLFILSPIMLIALYKWGKKAAA----GIFVLIVLLSGCLFAT 463
             |.:|: :...|:|:.|||.:||||::::||.|..|:|:.|:..|    .|...:|:.:|...|.
 Worm   229 TFTSNWQSTPTCMGYLWYLGLDMQLYMVAPIFLNLLHKFPKRGMALTITTIIASMVIRAGYCTAY 293

  Fly   464 IMVNKYSLVLKNFSMDAQK------------DLYFATHTHATPWLTGFLFGYSLHLNRGKKFQL- 515
            ...|:..:.:...|...|.            |:|...:|...|:|.|.|.||   :....|:.: 
 Worm   294 GTCNQSDVDIPFISYPGQDAETLKSIYAGLWDMYSRPYTKCGPFLIGLLLGY---ITVSSKYIMV 355

  Fly   516 ---SKVVAWSGWILCLAMIFTSIFALYPYAKWTGPDLSTFAEASYYTLTRVGWCMALCWVIFAC- 576
               ||.:..|..|:.:|    :|:|:.| ..|.....:|.....|..:.|..:.||:..:|.|. 
 Worm   356 STTSKTLFRSSLIVAIA----TIYAILP-EYWNPNAGNTLYNTVYTAVFRSVFAMAISGMIAALY 415

  Fly   577 -MNGYGGLANSFLSSPLWQPLSRLSYSVYMWHM----FFQEINIRSMRTNSYFSNYTIMLNFWST 636
             ...|..      ::|::..|::|:|:.|:.||    .|..:......|:..  :..::|.|.:.
 Worm   416 FRQEYRP------TNPIFAMLAKLTYNAYLLHMPVVYIFNWLPFLQAATSPI--HLLLVLPFVAI 472

  Fly   637 FGFAVLFAYVMHLVIEAPFGGL 658
            ..|  :.|.:.:|.||||.|.|
 Worm   473 LSF--IAALIFYLFIEAPIGHL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10182NP_651158.1 NRF 70..173 CDD:466307 2/10 (20%)
OafA 264..655 CDD:441440 106/435 (24%)
rhy-1NP_495954.1 OafA 86..489 CDD:441440 106/438 (24%)

Return to query results.
Submit another query.