DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10175 and nlgn1

DIOPT Version :9

Sequence 1:NP_001287487.1 Gene:CG10175 / 42773 FlyBaseID:FBgn0039084 Length:707 Species:Drosophila melanogaster
Sequence 2:XP_017949302.2 Gene:nlgn1 / 100329186 XenbaseID:XB-GENE-6041753 Length:859 Species:Xenopus tropicalis


Alignment Length:667 Identity:182/667 - (27%)
Similarity:280/667 - (41%) Gaps:170/667 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 VRSLRKER----EIVATTSLGKVRGRYQKYRSGERGGYYSFKGMRYGAPPTGARRFRAAEPEKPW 205
            :.::|.::    :.|..|:.|||||..::..:...|....|.|:.|.|||.|.|||:..||...|
 Frog    40 IATVRSQKLDDVDPVVLTTYGKVRGFKKELNNEILGPVVQFLGVPYAAPPIGERRFQPPEPPTMW 104

  Fly   206 SGIRDASREGQSCPHKNMI----------------LDTFKG-----DEDCLFVNVFT-------- 241
            ..|:::::....|| :|::                ||....     .||||::|::.        
 Frog   105 GDIKNSTQFAPVCP-QNIVGGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDVKRI 168

  Fly   242 -------------------TQMPKDD----ESAEQ--------PKLPVMVWLHGGGFSFGSGNSF 275
                               |:...||    |.||.        || ||||::|||.:..|:||.|
 Frog   169 SKECARKPGKKICRKEGPLTKKQTDDLGDNEGAEDEDIRDSGGPK-PVMVYIHGGSYMEGTGNVF 232

  Fly   276 ------LYGPDYLVAEDIVLVTLNYRLGPLGFLTAGPDA-PGNQGLKDQVLALKWVRDNIAAFGG 333
                  .||       :::::|:|||||.||||:.|..| .||.||.|.:.||:|..:||..|||
 Frog   233 DGSVLASYG-------NVIVITVNYRLGVLGFLSTGDQASKGNYGLLDLIQALRWTSENIGFFGG 290

  Fly   334 DPNQVTIFGESAGASSVQLLLL---------SSQAKGLFHRAISQSGSALNPWSMSASSSQRAAR 389
            ||.::|:||..||||.|.||.|         |:..||||.|||:|||:||:.|::|...::.|..
 Frog   291 DPLRITVFGSGAGASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARI 355

  Fly   390 LAANLGYVGANKTE--DILDFLRRVPAMKLVEAAPTTITAEDQRNNIGLPFVPVVEGYWNQDSQE 452
            ||..   ||.|.::  ::::.|::.|..:||:       .:.|.....:.|.||::|....|..:
 Frog   356 LATK---VGCNMSDSGELVECLQKKPYRELVD-------QDIQPVRYHIAFGPVIDGDVIPDDPQ 410

  Fly   453 EQFYEEPFLTQHPSDMYHSQNFNSDVAYMTGYNTHEAMLFIRRLRKNPQLLSIIENDF--GRLVP 515
            ....:..||             |.|:  |.|.|..|.:.|:.....:...:|..:.||  ...|.
 Frog   411 VLMEQGEFL-------------NYDI--MLGVNQGEGLKFVESTVDHEDGVSSSDFDFAVSNFVD 460

  Fly   516 QDLNVTESHDRVTREIRSFYLGSKHVGIESVDE---------MIALLTDLMFLQGIRRTARNHAK 571
            .....||..|.:...|:..|       .:..|.         ::||.||..::.....||..|:.
 Frog   461 NLYGYTEGKDILRETIKFMY-------TDWADRNNPETRRKTLLALFTDHQWVAPAVATADLHSN 518

  Fly   572 FGNAPVYMYRFSFDGSLGLYKRMLGIPRPG---VCHGDELGYLFKFGFFN-LSLDP---KSMEVQ 629
            || :|.|.|.|        |........|.   ..||||:.|:|...... ..|.|   ...:|.
 Frog   519 FG-SPTYFYAF--------YHHCQTDQVPAWADASHGDEIPYVFGIPMIGPTELFPCNFSKNDVM 574

  Fly   630 VKNRMVRMWTNFAKYGSPT-------------PDSEDPMLTTKWAPIDPTNVMNSLNYMDISANL 681
            :...::..||||||.|.|.             |:..:.:..|:::..|..       |:.|....
 Frog   575 LSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYSQKDQL-------YLHIGLKP 632

  Fly   682 AMKTNPEPERQRFWDEM 698
            .:|.:....:...|.|:
 Frog   633 RVKEHYRATKVNLWLEL 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10175NP_001287487.1 COesterase 157..695 CDD:278561 178/646 (28%)
nlgn1XP_017949302.2 COesterase 52..646 CDD:395084 179/650 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.