DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10177 and Obscn

DIOPT Version :9

Sequence 1:NP_651150.1 Gene:CG10177 / 42772 FlyBaseID:FBgn0039083 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001164983.2 Gene:Obscn / 380698 MGIID:2681862 Length:8032 Species:Mus musculus


Alignment Length:421 Identity:89/421 - (21%)
Similarity:175/421 - (41%) Gaps:65/421 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LGSRRVGPPLHKKALRVCFLRNGDRHFK--------GV--------NLVISRAHFKDFPALLQG- 55
            |||.|.|..|:.::..   ||..|:|.:        |.        ::.:.......|.|:::| 
Mouse  6417 LGSTRGGGELYMQSPA---LRARDQHHREQIVAAVEGAPSMQVTIEDVQVQVGDMAQFDAVIEGH 6478

  Fly    56 ---VTESLKRHVLLRSAIAHFRRTDGSH----LTSLSCFRETDIVICCCKNE--EIICVKYSINK 111
               :....|....|.|:....:|.||:.    ||.::. .:..:..|...|.  :::|       
Mouse  6479 PPPIVTWYKGSTQLTSSARLSQRQDGTTYSLVLTDVAP-HDAGVYTCVANNAGGQVLC------- 6535

  Fly   112 DFQRMVDSCKRWGQHHLDS-GTLESMKSHDLPEAIQLYIETIEPVEHNTRTLIYRGQTRANRTKC 175
            ..:.:|.     |...||: ..:...|.|.       :.:..|.:.......:.|.|.:.|:..|
Mouse  6536 KAELLVH-----GGDKLDAENQVYRRKLHS-------FYDVQEEIGRGVFGFVKRVQHKGNKMFC 6588

  Fly   176 TVKMVNKQTQSNDRGDTYMEAEVLRQLQSHPNIIELMYTVEDERYMYTVLEHLDCNMQKVIQ--- 237
            ..|.:  ..:|..|...|.|.::|..| .||.:..|:...|..:.:..:||.  |:.::::.   
Mouse  6589 AAKFI--PLRSKTRAQAYQERDILATL-GHPLVTGLLDQFETRKTLILILEL--CSSEELLDRLF 6648

  Fly   238 KRGILSEADARSVMRCTVSALAHMHQLQVIHRDIKPENLLVCSSSGKWNFKMVKVANFDLATYYR 302
            |:|:::||:.:..::..|..|.::|...::|.||||.|:|:...:.    :.:|:.:|..|....
Mouse  6649 KKGVVTEAEVKVYIQQLVEGLHYLHSHGILHLDIKPPNILMVHPAR----EDIKICDFGFAQKIT 6709

  Fly   303 GSK-LYVRCGTPCYMAPEMIAMSGYDYQVDSWSLGVTLFYMLCGKMPFASACKNSKEIYAAIMSG 366
            .|: .|.:.|:|.:::||:|..:......|.|::||..:..|....|||.  ::.:.....::.|
Mouse  6710 PSEPQYSKYGSPEFVSPEIIEQNPVSEGSDIWAMGVISYLSLTCSSPFAG--ESDRATLLNVLEG 6772

  Fly   367 GPTYPKDMESVMSPEATQLIDGLLVSDPSYR 397
            ..::.....:.:|.:|...|...|...|..|
Mouse  6773 RVSWSSPTAAHLSEDAKDFIKATLQRTPRAR 6803

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG10177NP_651150.1 DCX 18..108 CDD:214711 19/115 (17%)
S_TKc 164..409 CDD:214567 57/238 (24%)
PKc_like 164..403 CDD:304357 57/238 (24%)
ObscnNP_001164983.2 I-set 3855..3938 CDD:254352
IGc2 3868..3926 CDD:197706
I-set 3943..4026 CDD:254352
Ig_2 3951..4021 CDD:290606
I-set 4031..4114 CDD:254352
IGc2 4044..4102 CDD:197706
I-set 4119..4202 CDD:254352
I-set 4208..4291 CDD:254352
ig 4211..4279 CDD:278476
I-set 4297..4380 CDD:254352
Ig 4313..4381 CDD:143165
I-set 4385..4471 CDD:254352
Ig 4399..4464 CDD:299845
I-set 4478..4563 CDD:254352
Ig 4490..4547 CDD:299845
I-set 4566..4654 CDD:254352
I-set 4660..4745 CDD:254352
FN3 4749..4834 CDD:238020
I-set 4862..4923 CDD:254352
I-set 5127..5217 CDD:254352
Ig 5144..5213 CDD:143165
I-set 5357..5447 CDD:254352
Ig 5375..5444 CDD:143165
I-set 5489..5579 CDD:254352
Ig 5513..5579 CDD:299845
Ig 5599..5695 CDD:299845
I-set 5600..5695 CDD:254352
SH3_Obscurin_like 5831..5893 CDD:212958
RhoGEF 5926..6102 CDD:295373
PH_Obscurin 6111..6235 CDD:270059
I-set 6243..6335 CDD:254352
Ig 8..90 CDD:299845
I-set 9..98 CDD:254352
I-set 109..200 CDD:254352
Ig 126..190 CDD:143165
IG 246..326 CDD:214652
Ig 250..319 CDD:299845
I-set 333..416 CDD:254352
I-set 423..499 CDD:254352
FN3 513..600 CDD:238020
I-set 615..>671 CDD:254352
IGc2 <732..781 CDD:197706
IGc2 878..941 CDD:197706
IGc2 970..1033 CDD:197706
IGc2 1062..1125 CDD:197706
IGc2 1154..1217 CDD:197706
IGc2 1246..1309 CDD:197706
IGc2 1338..1401 CDD:197706
IGc2 1430..1493 CDD:197706
IGc2 1522..1585 CDD:197706
IGc2 1614..1677 CDD:197706
IGc2 1706..1769 CDD:197706
IGc2 1798..1861 CDD:197706
IGc2 1891..1950 CDD:197706
I-set 1967..2050 CDD:254352
Ig 1983..2051 CDD:143165
I-set 2057..2140 CDD:254352
IGc2 2069..2132 CDD:197706
I-set 2147..2229 CDD:254352
I-set 2324..2406 CDD:254352
Ig 2331..2395 CDD:299845
I-set 2449..2530 CDD:254352
Ig 2464..2531 CDD:143165
I-set 2626..2709 CDD:254352
Ig 2642..2710 CDD:143165
I-set 2716..2798 CDD:254352
I-set 2804..2887 CDD:254352
Ig 2820..2888 CDD:143165
I-set 2894..>2962 CDD:254352
I-set 2985..3065 CDD:254352
Ig_2 2989..3060 CDD:290606
I-set 3073..3156 CDD:254352
IG 3168..3247 CDD:214652
I-set 3254..3336 CDD:254352
Ig_2 3258..3337 CDD:290606
I-set 3342..3425 CDD:254352
ig 3346..3412 CDD:278476
I-set 3431..3513 CDD:254352
IGc2 3443..3501 CDD:197706
I-set 3519..3601 CDD:254352
IGc2 3531..3589 CDD:197706
I-set 3612..3689 CDD:254352
IGc2 3619..3677 CDD:197706
I-set 3695..>3763 CDD:254352
I-set 3768..3850 CDD:254352
IGc2 3780..3838 CDD:197706
Ig 6260..6327 CDD:143165
IG_like 6349..6427 CDD:214653 5/9 (56%)