DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10177 and zyg-8

DIOPT Version :9

Sequence 1:NP_651150.1 Gene:CG10177 / 42772 FlyBaseID:FBgn0039083 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_499571.2 Gene:zyg-8 / 176639 WormBaseID:WBGene00006993 Length:802 Species:Caenorhabditis elegans


Alignment Length:558 Identity:131/558 - (23%)
Similarity:210/558 - (37%) Gaps:184/558 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RVGP---PLHKKALRVCFLRNGDRHFKGVNLVISRAHFKDFPALLQGVTESLKRHVL-----LRS 68
            |:||   |...||.|:.|.||||::|||:...:.....|.    :|.:.|.|.:.|:     |..
 Worm   198 RIGPSGYPHLLKAKRLRFYRNGDQYFKGIQYALQSDRVKS----MQPLMEDLMKTVICDSTALPH 258

  Fly    69 AIAHFRRTDGS-HLTSLSCFRETDIVIC------------------------------------- 95
            .|.|....||: .:||:..|.:....:|                                     
 Worm   259 GIRHIFTIDGAQRITSVDQFEDGGGYVCSSTDAFKPVDYSRAAEPSWRLTLANRYNRHLETKKLA 323

  Fly    96 ------CCKNEEII----------------CVKYSINKDFQRMVDSCKR--WGQHHLDSGTL--- 133
                  |.:|.:.:                ..::.:||...|..|...|  .....||||.:   
 Worm   324 LSVVEPCHENTDFVFPRIIKVIRNGVKPRRISRHLLNKKTARSFDQVLRDLTFVVKLDSGAIRKL 388

  Fly   134 ---------------------------ESMKSHDLPEAIQLYIETIEPVEHNTRTLIYRGQTRAN 171
                                       |.|.:.||..|.:.:.........|.|. ..|..|..|
 Worm   389 FTLSGRPVLSLQDFFRDDDVFVAYGGNEKMAADDLLVASEEHKSVGSGTSSNMRR-TSRRSTMPN 452

  Fly   172 R---------------------------------------TKCTVKMVNKQTQSNDR-------- 189
            |                                       |....::::| |.::||        
 Worm   453 RNESLRHDRSGSVIPDQDQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDK-TNNDDRKAMKVIAR 516

  Fly   190 ----GDTY---MEAEVLRQLQSHPNIIELM--YTVEDERY-------MYTVLEHLDCNMQKVIQK 238
                |..:   ||..:|::: .|..|::|.  :.|:|..|       |..:.|||     :::::
 Worm   517 ENVIGKEHLIEMELAILQKI-DHTFIVQLYDHWFVDDSYYLSLELIEMGDLFEHL-----RIVRR 575

  Fly   239 RGILSEADARSVMRCTVSALAHMHQLQVIHRDIKPENLLVCSSS-GKWNFKMVKVANFDLATYYR 302
               :.|.||..:|.|...||.::|:|.::|||:|.||||:.... |:..   ||:|:|.||....
 Worm   576 ---VPERDAVRMMTCLGQALEYIHELGIVHRDVKLENLLIVKDEFGELG---VKLADFGLAAEMP 634

  Fly   303 G--SKLYVRCGTPCYMAPEMIAMSGYDYQVDSWSLGVTLFYMLCGKMPFASACKNSKEIYAAIMS 365
            .  ..|...||||.|:|||::..:||..:||.|:.||.|:.:|.|..||.|:..:.:::::||||
 Worm   635 KDFGVLSTICGTPTYVAPEVLNKTGYGCKVDIWAAGVILYAILVGFPPFQSSDGSEQDLFSAIMS 699

  Fly   366 GGPTYPKDMESVMSPEATQLIDGLLVSDPSYRVPIAEL 403
            |..::|......:|.....||..|:.:||.:|....||
 Worm   700 GEFSFPSPSWDDVSWSVRHLIMCLIHTDPFHRYSAGEL 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10177NP_651150.1 DCX 18..108 CDD:214711 27/154 (18%)
S_TKc 164..409 CDD:214567 84/306 (27%)
PKc_like 164..403 CDD:304357 82/304 (27%)
zyg-8NP_499571.2 DCX 206..298 CDD:214711 25/95 (26%)
DCX 335..423 CDD:214711 11/87 (13%)
STKc_DCKL 481..742 CDD:270997 80/270 (30%)
S_TKc 482..743 CDD:214567 80/269 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.946395 Normalized mean entropy S5828
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44167
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.910

Return to query results.
Submit another query.