DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10177 and Speg

DIOPT Version :9

Sequence 1:NP_651150.1 Gene:CG10177 / 42772 FlyBaseID:FBgn0039083 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_011236945.1 Gene:Speg / 11790 MGIID:109282 Length:3272 Species:Mus musculus


Alignment Length:428 Identity:95/428 - (22%)
Similarity:165/428 - (38%) Gaps:87/428 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SRRVGPPLHKKALRVCFLRNGDRH-FKGVNLVISRAHFKDFPALLQGVTES-------------- 59
            |||...||      .|..||  || .|..::.:..|....|.::::.|...              
Mouse  1470 SRRDLGPL------TCSARN--RHGTKACSVTLELAEAPRFESIMEDVEVGPGETARFAVVVEGK 1526

  Fly    60 -------LKRHVLLRSAIAHFRRTDGSHLTSLSCFRETDIVICCCKNEE---IICVKYSINKDFQ 114
                   .|..|||         .:.:|::.:....|..:|:....:::   ..|...::..:. 
Mouse  1527 PLPDIMWYKDEVLL---------AESNHVSFVYEENECSLVLLSAGSQDGGVYTCTARNLAGEV- 1581

  Fly   115 RMVDSCKRWGQHHLDSGTLESMKSHDLPEAIQLYIETI-EPVEHNTRTL---------IYRGQ-- 167
                |||         ..|..:.:....|     :|.: |..||..|.|         |.||.  
Mouse  1582 ----SCK---------AELSVLSAQTAME-----VEGVGEDEEHRGRRLSDYYDIHQEIGRGAFS 1628

  Fly   168 ------TRANRTKCTVKMVNKQTQSNDRGDTYMEAEVLRQLQSHPNIIELMYTVEDERYMYTVLE 226
                  .|::..:...|.:  .:|:..:.....||.:|.:|| |..::......|..|.:..|.|
Mouse  1629 YLRRVVERSSGLEFAAKFI--PSQAKPKASARREARLLARLQ-HGCVLYFHEAFERRRGLVIVTE 1690

  Fly   227 HLDCNMQKVIQKRGILSEADARSVMRCTVSALAHMHQLQVIHRDIKPENLLVCSSSGKWNFKMVK 291
            .....:.:.:.::..:.|::.|:.||..:..:.::||..|:|.|:|||||||...:|  ..:.|:
Mouse  1691 LCTEELLERMARKPTVCESETRTYMRQVLEGICYLHQSHVLHLDVKPENLLVWDGAG--GEEQVR 1753

  Fly   292 VANFDLATYYR-GSKLYVRCGTPCYMAPEMIAMSGYDYQVDSWSLGVTLFYMLCGKMPFASACKN 355
            :.:|..|.... |...|.:.|||.::|||::..|......|.|.:||..|..|.|..||..  :|
Mouse  1754 ICDFGNAQELTPGEPQYCQYGTPEFVAPEIVNQSPVSGVTDIWPVGVVAFLCLTGISPFVG--EN 1816

  Fly   356 SKEIYAAIMSGGPTYPKDMESVMSPEATQLIDGLLVSD 393
            .:.....|.:....:.:.....:|.||...:..:||.|
Mouse  1817 DRTTLMNIRNYNVAFEETTFLSLSREARGFLIKVLVQD 1854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10177NP_651150.1 DCX 18..108 CDD:214711 17/114 (15%)
S_TKc 164..409 CDD:214567 61/239 (26%)
PKc_like 164..403 CDD:304357 61/239 (26%)
SpegXP_011236945.1 I-set 45..127 CDD:369462
PHA03247 <320..697 CDD:223021
I-set 737..826 CDD:369462
SPEG_u2 827..883 CDD:293256
I-set 884..974 CDD:369462
Ig 988..1073 CDD:386229
I-set 1079..1168 CDD:369462
I-set 1203..1292 CDD:369462
FN3 1297..>1374 CDD:238020
I-set 1500..1589 CDD:369462 14/111 (13%)
STKc_SPEG_rpt1 1613..1869 CDD:271010 62/249 (25%)
PHA03247 <1951..2355 CDD:223021
PHA03307 2235..>2557 CDD:223039
I-set 2597..2687 CDD:369462
FN3 2691..2777 CDD:238020
PHA03247 <2760..2981 CDD:223021
STKc_SPEG_rpt2 2967..3223 CDD:271013
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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