DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and Kcnj13

DIOPT Version :10

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_446060.1 Gene:Kcnj13 / 94341 RGDID:621661 Length:360 Species:Rattus norvegicus


Alignment Length:346 Identity:120/346 - (34%)
Similarity:185/346 - (53%) Gaps:28/346 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SRNFRPGS--MRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFIL 146
            |||.:..:  :.:..||.|.|:|...:.....||..| :|:|.:..::|.:|||.:|.|:.||::
  Rat     3 SRNCKVNAPLLSQRYRRMVTKDGHSTLQMDGAQRGLV-YLRDAWGILMDMRWRWMMLVFSASFVV 66

  Fly   147 SWLFFALIWWLIIYTHGDLEEPH--LPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRT 209
            .||.||::|:.:...:||||..|  .|||.     ..||..|..||:.|.||:|||.|||||...
  Rat    67 HWLVFAVLWYAVAEMNGDLEIDHDVPPENH-----TICVKHITSFTAAFSFSLETQLTIGYGTMF 126

  Fly   210 TSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRV 274
            .|.:||.||.::..|.:.|:|..||:.|...||:.|.|.||.::.|:..||:..:||..:|:|:|
  Rat   127 PSGDCPSAIALLAIQMLLGLMLEAFITGAFVAKIARPKNRAFSIRFTDLAVVAHKDGKPNLIFQV 191

  Fly   275 GDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSD--LFFIWPMVIEHKIDENS 337
            .:.|.|.:  ..||...:..:..:.||:   |.|.::...|...|:  .|||:|:...|.|..:|
  Rat   192 ANTRPSPL--TSVRVSAVLYQERENGEL---YQTSVDFHLDGISSEECPFFIFPLTYYHTITPSS 251

  Fly   338 PLYNLNATDMLQDK----FEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQA 398
            ||..|     ||.:    ||:||.|....|.||:..|.|:||:.:||:..||| ..::.......
  Rat   252 PLATL-----LQHETPSHFELVVFLSAMQEGTGEICQRRTSYLPSEIMLHHRF-AALMTRGSKGE 310

  Fly   399 YEIDYARFNETT-QVDTPLCS 418
            |::....|::|. :..||:.|
  Rat   311 YQVKMENFDKTVPEHPTPVVS 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..246 CDD:460023 58/147 (39%)
IRK_C 253..424 CDD:465439 53/173 (31%)
Kcnj13NP_446060.1 IRK 21..163 CDD:460023 58/147 (39%)
Selectivity filter. /evidence=ECO:0000305 119..124 4/4 (100%)
IRK_C 170..331 CDD:465439 52/171 (30%)

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