DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj12b

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_001335950.1 Gene:kcnj12b / 795702 ZFINID:ZDB-GENE-091118-79 Length:421 Species:Danio rerio


Alignment Length:415 Identity:174/415 - (41%)
Similarity:245/415 - (59%) Gaps:33/415 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ISNPQSYPITIVPNRPTSYYGLSQ-------NGKPFPRQPSCRSRNFRPGSMRRVRRRAVFKNGD 105
            :..|..|.|..........:|...       |||...|              |::|.|.|.|.|.
Zfish     3 VGKPHRYNIVSSSEEDVGRHGTMPALGNGFGNGKIQTR--------------RKLRSRFVNKTGQ 53

  Fly   106 CNVVQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIWWLIIYTHGDLEEPHL 170
            |||...|:..:..|:|.|::||.||.:|||..|.|:|:|::|||.|...:|||...|||||:|  
Zfish    54 CNVSFAHMDEQSQRYLADIFTTCVDSRWRWMFLLFSLAFVISWLAFGFAFWLIALVHGDLEKP-- 116

  Fly   171 PENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFM 235
                 :..:.|||..::.|.:.||||:|||.|||||.|..:.|||.|:||:.||||.|.:..:||
Zfish   117 -----QENFTPCVMQVNSFVAAFLFSVETQTTIGYGFRCVTEECPLAVFMVVFQSIVGCIIDSFM 176

  Fly   236 AGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEG 300
            .|.:.|||.|.|:||:|:|||.:|||..|||.|.||:|||::|||||:.|.||||||:.:.|:||
Zfish   177 IGAIMAKMARPKKRAETILFSHNAVISMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEG 241

  Fly   301 EVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQDKFEIVVILEGTVEST 365
            |.:.....::.:|.|.....:|.:.|:.|.|:|:|.|||:.:|..|:....|||||||||.||:|
Zfish   242 EYIPLDQIDINVGYDQGLDRIFLVAPLTILHEINEESPLFGINQQDLETSDFEIVVILEGMVEAT 306

  Fly   366 GQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQV-DTPLCSARELNEIYKIQ 429
            ..:.|.||||:::||||||||:|||.  ::...|::||:.|::|.:| .||.|||::|.:...::
Zfish   307 AMTAQVRSSYLSSEILWGHRFEPVVF--EERNQYKVDYSHFHKTYEVPSTPRCSAKDLEDNKSLE 369

  Fly   430 EG--FRTPAETTFTMRQLSHNHSDQ 452
            .|  |....|..|..|.......|:
Zfish   370 SGANFCYENELAFISRDEEEQEEDR 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 159/336 (47%)
kcnj12bXP_001335950.1 IRK_N 2..47 CDD:312087 10/57 (18%)
IRK 48..367 CDD:307239 157/327 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 195 1.000 Domainoid score I3095
eggNOG 1 0.900 - - E1_KOG3827
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6393
orthoMCL 1 0.900 - - OOG6_101017
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X128
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.830

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