DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj12a

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_005162964.1 Gene:kcnj12a / 569146 ZFINID:ZDB-GENE-131126-14 Length:437 Species:Danio rerio


Alignment Length:397 Identity:173/397 - (43%)
Similarity:243/397 - (61%) Gaps:26/397 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RPTSYYGLSQNGKPFPRQPSCRSRNFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYT 126
            |.|:.:|...||          ..|.:..:.|:.|.|.|.|||.|||...::..:..|::.|::|
Zfish    20 RLTTMHGGGMNG----------YGNGKIHTRRKSRNRFVKKNGQCNVQFTNMDEKSQRYMADIFT 74

  Fly   127 TMVDWQWRWTLLAFALSFILSWLFFALIWWLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTS 191
            |.||.:||:.|:.|.|.|::|||.|.|.:|:|...||||:.|...:|     :.|||..::||.:
Zfish    75 TCVDIRWRYMLIVFTLVFVISWLAFGLAFWVIALLHGDLDNPAGDDN-----FTPCVLQVNGFIA 134

  Fly   192 CFLFSIETQHTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFS 256
            .||||||||.|||||.|..:.|||.|:|::.||||.|.:...||.|.:.|||.|.|:||||||||
Zfish   135 AFLFSIETQTTIGYGFRCVTEECPLAVFLVVFQSIVGSIIDCFMIGAIMAKMARPKKRAQTLLFS 199

  Fly   257 KHAVICQRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDL 321
            .:|||..|||.|.||:|||::|||||:.|.||||||:.:.|.|||.:.....::.:|.|.....:
Zfish   200 HNAVIAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRVTTEGEYIPLDQLDINVGFDKGLDRI 264

  Fly   322 FFIWPMVIEHKIDENSPLYNLNATDMLQDKFEIVVILEGTVESTGQSTQARSSYINTEILWGHRF 386
            |.:.|:.|.|:||..|||:.::..|:....|||||||||.||:|..:.||||||:.:||||||||
Zfish   265 FLVSPITILHQIDHESPLFGISKQDLETADFEIVVILEGMVEATAMTAQARSSYLASEILWGHRF 329

  Fly   387 DPVVLYNKDLQAYEIDYARFNETTQV-DTPLCSARELNEIYKIQEGFRTPAETTFTMRQ----LS 446
            :||:...|:  .|::||:.|::|.:| .||.|||:::.|    .:....|...:|....    ||
Zfish   330 EPVLFEEKN--QYKVDYSHFHKTYEVPSTPRCSAKDMME----NKYLVVPTANSFCYENELAILS 388

  Fly   447 HNHSDQA 453
            |...|.:
Zfish   389 HEEEDDS 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 158/334 (47%)
kcnj12aXP_005162964.1 IRK_N 2..47 CDD:285640 8/36 (22%)
IRK 48..371 CDD:279361 158/333 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 195 1.000 Domainoid score I3095
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H7793
Inparanoid 1 1.050 366 1.000 Inparanoid score I2116
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6393
orthoMCL 1 0.900 - - OOG6_101017
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X128
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.980

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