DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj1a.6

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001038640.1 Gene:kcnj1a.6 / 569052 ZFINID:ZDB-GENE-050420-272 Length:370 Species:Danio rerio


Alignment Length:334 Identity:124/334 - (37%)
Similarity:199/334 - (59%) Gaps:9/334 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 RRVRR-RAVFKNGDCNV-VQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIW 155
            ||:|: |.|.|:|.||: :...:.::...::.|.:||:|:.:||:.:|.|..|:.|||..|.|:|
Zfish    16 RRIRKNRLVTKDGRCNIELGNVMHKKGFTYVLDFWTTLVETRWRFIILYFVASYTLSWFIFGLLW 80

  Fly   156 WLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFM 220
            :.:..::|||    |.:|..|. ..|||..::|.|..:|:|:|||.|||.|....:.:||..:.:
Zfish    81 YWLAKSNGDL----LWQNPSED-HTPCVHNVNGMTYAYLYSLETQTTIGCGNIYITDQCPAGVAL 140

  Fly   221 MCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGA 285
            :..|.:.||:...|..|||..|:|..|:||:|:.|||.||||.:.|||.|..||.::||:.:||:
Zfish   141 IIIQVVIGVLIGIFWCGIVMTKLTLPKKRAKTITFSKSAVICPKKGTLCLQIRVANLRKTLMIGS 205

  Fly   286 GVRAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQD 350
            .:..:|:||..| |||.:......::...|....:|||:.|:.:.|.||::||.:::....:.|.
Zfish   206 QIYGKLLRTTVT-EGETVILDQVNIDFMVDAGKDNLFFVSPLTLCHIIDKSSPFFDMAVDTLHQQ 269

  Fly   351 KFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVDTP 415
            .||:||.|:|..|||..|.|.|:|||..||:||:.|.|::..:|: ..|.::::.|.:...|.|.
Zfish   270 DFELVVFLDGMAESTSSSCQVRTSYIPQEIVWGYDFLPIISRSKE-GKYRVEFSNFAKVVPVPTA 333

  Fly   416 LCSARELNE 424
            .||....||
Zfish   334 HCSHCYHNE 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 120/326 (37%)
kcnj1a.6NP_001038640.1 IRK 24..348 CDD:279361 120/326 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3827
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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