DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and Kcnj1

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001161826.1 Gene:Kcnj1 / 56379 MGIID:1927248 Length:392 Species:Mus musculus


Alignment Length:363 Identity:147/363 - (40%)
Similarity:224/363 - (61%) Gaps:13/363 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RVRRRAVFKNGDCNVVQKHLQ-RRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIWWL 157
            |.|.|.|.|:|.||:...::. :.|..|..|::||::|.:||:.:..|..:|:.||..|.|:|::
Mouse    38 RQRARLVSKDGRCNIEFGNVDAQSRFIFFVDIWTTVLDLKWRYKMTVFITAFLGSWFLFGLLWYV 102

  Fly   158 IIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFMMC 222
            :.|.|.||.|.:.|:|:     .|||..|:|.||.||||:|||.|||||.|..:.:|..|||::.
Mouse   103 VAYVHKDLPEFYPPDNR-----TPCVENINGMTSAFLFSLETQVTIGYGFRFVTEQCATAIFLLI 162

  Fly   223 FQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGV 287
            ||||.||:.::||.|.:.||::|.|:||:|:.|||:|||.:|.|.|.|:.||.::|||.:||:.:
Mouse   163 FQSILGVIINSFMCGAILAKISRPKKRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLIGSHI 227

  Fly   288 RAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQDKF 352
            ..:|::|..|.|||.:....|.:....|....:||||.|:.|.|.||.|||.:::.|..:.|..|
Mouse   228 YGKLLKTTITPEGETIILDQTNINFVVDAGNENLFFISPLTIYHIIDHNSPFFHMAAETLSQQDF 292

  Fly   353 EIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVDTP-- 415
            |:||.|:||||||..:.|.|:|||..|:|||:||.|:|...|: ..|.:|:..|.:|.:|:||  
Mouse   293 ELVVFLDGTVESTSATCQVRTSYIPEEVLWGYRFVPIVSKTKE-GKYRVDFHNFGKTVEVETPHC 356

  Fly   416 -LCSARELNEIYKIQEGFRTPAETTFTMRQLSHNHSDQ 452
             :|...|.:...:::.|:..|   .|.:.::......|
Mouse   357 AMCLYNEKDARARMKRGYDNP---NFVLSEVDETDDTQ 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 141/337 (42%)
Kcnj1NP_001161826.1 IRK 44..372 CDD:279361 140/333 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3827
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

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