DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj8

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001025324.1 Gene:kcnj8 / 561090 ZFINID:ZDB-GENE-060308-1 Length:416 Species:Danio rerio


Alignment Length:382 Identity:162/382 - (42%)
Similarity:242/382 - (63%) Gaps:40/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PRQPSCRSR-NFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAF 140
            ||:|..|.| |         :.|.:.|:|.||:..|:: |.:.|||||::||:||.:||:||:.|
Zfish    22 PRKPVFRDRVN---------KARFIAKSGACNLAHKNI-REQGRFLQDVFTTLVDLKWRFTLVIF 76

  Fly   141 ALSFILSWLFFALIWWLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGY 205
            .::|:.|||.||:.|||:.:.||||:....|..::      ||:.::.|||.||||||.|.|||:
Zfish    77 TMTFLCSWLLFAMSWWLVAFGHGDLDTDRKPAVEQ------CVTNVNSFTSAFLFSIEVQVTIGF 135

  Fly   206 GVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSL 270
            |.|..:..||.||..:..|:|.|::.:|.|.|.:|.|..::.:||:||:||:||||..|:..|..
Zfish   136 GGRMITERCPIAIAFLILQNIIGLIINAVMLGCIFMKTAQSHRRAETLIFSRHAVIAVRNNRLCF 200

  Fly   271 MFRVGDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELEIGTDD--SGSDLFFIWPMVIEHKI 333
            |.||||:|||.||.|.||.|::|...|.||||:.  ..::::.|:.  :|:.:|.:.|::|.|.|
Zfish   201 MIRVGDLRKSMIINAVVRLQVVRKTMTPEGEVIP--IQQIDVQTESAVAGNSIFLLAPLIICHVI 263

  Fly   334 DENSPLYNLNATDMLQDKFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQA 398
            |::||||:|:|.::.....|::|||||.||:||.:||||:||:..||.|||||.|:|  .::...
Zfish   264 DKDSPLYDLSAMELQCSDLEVIVILEGVVETTGITTQARTSYVTEEIQWGHRFVPIV--TEEEGV 326

  Fly   399 YEIDYARFNETTQVDTPLCSARELNE-----IYKIQEGFRTPAETTFTMRQLSHNHS 450
            |.:||::|..|.:|.||.||||||:|     |..:|:.            :|||.:|
Zfish   327 YSVDYSKFGNTVKVATPRCSARELDEKPSILIQTLQKS------------ELSHQNS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 151/340 (44%)
kcnj8NP_001025324.1 IRK 37..362 CDD:279361 150/335 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3827
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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