DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj1a.2

DIOPT Version :10

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001014334.2 Gene:kcnj1a.2 / 541499 ZFINID:ZDB-GENE-050327-22 Length:370 Species:Danio rerio


Alignment Length:336 Identity:127/336 - (37%)
Similarity:203/336 - (60%) Gaps:13/336 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 RRVRR-RAVFKNGDCNV-VQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIW 155
            :|:|: |.|.|:|.||: ....|.|.|..::.|.:||:|:.:||:.||.|..||.|||..|.|:|
Zfish    16 QRIRKNRLVTKDGRCNIEFGNVLHRSRFTYVLDFWTTLVETRWRFILLYFVASFTLSWFIFGLLW 80

  Fly   156 WLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFM 220
            :.:..::|||...:.|.:.:     |||.:::..|..:|:|:|:|.|||||....:.:||..:.:
Zfish    81 YWLARSNGDLLWQNPPPDHK-----PCVYSVNDLTYAYLYSLESQATIGYGNVYVTDQCPAGVAL 140

  Fly   221 MCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGA 285
            :..|.:.|::.|.|..|||..|:|..|:||:|:.||:.||||.:.|||.|..||.::||:.:||:
Zfish   141 ITIQMLIGLLISIFWCGIVMTKITLPKKRAKTITFSESAVICPKKGTLCLQIRVANLRKTLMIGS 205

  Fly   286 GVRAQLIRTKST-KEGEVMTQYFTELEIGTDDSGSD-LFFIWPMVIEHKIDENSPLYNLNATDML 348
            .:..:|:||..| .|..::.|...:..:   |:|.| |||:.|:.:.|.||::||.:|:.|..|.
Zfish   206 QIYGKLLRTTVTGGETNILDQVSIDFMV---DAGKDNLFFVCPLTLYHIIDKSSPFFNMAADTMH 267

  Fly   349 QDKFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVD 413
            |..||:||.|:...|:|..|.|.|:|||..||:||:.|.|::..:|: ..|::|::.|.:...|.
Zfish   268 QQDFELVVFLDSMAETTSSSCQVRTSYIPQEIMWGYDFLPIISRSKE-GRYQVDFSNFAKEVPVP 331

  Fly   414 TPLCSARELNE 424
            |..||....||
Zfish   332 TAHCSRCYHNE 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..246 CDD:460023 53/146 (36%)
IRK_C 253..424 CDD:465439 65/172 (38%)
kcnj1a.2NP_001014334.2 IRK 24..166 CDD:460023 53/146 (36%)
IRK_C 173..342 CDD:465439 65/172 (38%)

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