DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj1a.2

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001014334.2 Gene:kcnj1a.2 / 541499 ZFINID:ZDB-GENE-050327-22 Length:370 Species:Danio rerio


Alignment Length:336 Identity:127/336 - (37%)
Similarity:203/336 - (60%) Gaps:13/336 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 RRVRR-RAVFKNGDCNV-VQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIW 155
            :|:|: |.|.|:|.||: ....|.|.|..::.|.:||:|:.:||:.||.|..||.|||..|.|:|
Zfish    16 QRIRKNRLVTKDGRCNIEFGNVLHRSRFTYVLDFWTTLVETRWRFILLYFVASFTLSWFIFGLLW 80

  Fly   156 WLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFM 220
            :.:..::|||...:.|.:.:     |||.:::..|..:|:|:|:|.|||||....:.:||..:.:
Zfish    81 YWLARSNGDLLWQNPPPDHK-----PCVYSVNDLTYAYLYSLESQATIGYGNVYVTDQCPAGVAL 140

  Fly   221 MCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGA 285
            :..|.:.|::.|.|..|||..|:|..|:||:|:.||:.||||.:.|||.|..||.::||:.:||:
Zfish   141 ITIQMLIGLLISIFWCGIVMTKITLPKKRAKTITFSESAVICPKKGTLCLQIRVANLRKTLMIGS 205

  Fly   286 GVRAQLIRTKST-KEGEVMTQYFTELEIGTDDSGSD-LFFIWPMVIEHKIDENSPLYNLNATDML 348
            .:..:|:||..| .|..::.|...:..:   |:|.| |||:.|:.:.|.||::||.:|:.|..|.
Zfish   206 QIYGKLLRTTVTGGETNILDQVSIDFMV---DAGKDNLFFVCPLTLYHIIDKSSPFFNMAADTMH 267

  Fly   349 QDKFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVD 413
            |..||:||.|:...|:|..|.|.|:|||..||:||:.|.|::..:|: ..|::|::.|.:...|.
Zfish   268 QQDFELVVFLDSMAETTSSSCQVRTSYIPQEIMWGYDFLPIISRSKE-GRYQVDFSNFAKEVPVP 331

  Fly   414 TPLCSARELNE 424
            |..||....||
Zfish   332 TAHCSRCYHNE 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 124/328 (38%)
kcnj1a.2NP_001014334.2 IRK 24..348 CDD:279361 124/328 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3827
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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