DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj1a.1

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_957329.1 Gene:kcnj1a.1 / 386933 ZFINID:ZDB-GENE-031118-55 Length:370 Species:Danio rerio


Alignment Length:336 Identity:128/336 - (38%)
Similarity:195/336 - (58%) Gaps:9/336 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SMRRVRR-RAVFKNGDCNV-VQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFAL 153
            |.||.|: |.|.|:|.||: ....:.|.|..::.|.:||.|:.:||:.||.|..||.|||..|.|
Zfish    14 SERRGRKNRLVTKDGRCNIEFGNVMHRNRFAYVLDFWTTFVETRWRFILLYFVASFTLSWFIFGL 78

  Fly   154 IWWLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAI 218
            ||:.:...:|||...:.|     .|..||..:::..|..||||:|||.|||:|....:.:||..:
Zfish    79 IWYWLARNNGDLLWQNPP-----PGHKPCAFSVNDMTYAFLFSLETQSTIGFGNIYVTDQCPGGV 138

  Fly   219 FMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHII 283
            .::..|:|.|:..:.|..|||..|::..|:||:|:.||:.||||.:.|||.|..||.::||:.:|
Zfish   139 ALIVIQTIIGLFINIFWCGIVMTKISLPKKRAKTITFSESAVICPKKGTLCLQIRVANLRKTLMI 203

  Fly   284 GAGVRAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDML 348
            |:.:..:|:||..| .||.:......::...|....:|||:.|:.:.|.||::||.:|:....|.
Zfish   204 GSQIYGKLLRTTVT-GGETVILDQVSIDFMVDAGKDNLFFVCPLTLYHIIDKSSPFFNMAVDTMH 267

  Fly   349 QDKFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVD 413
            |..||:||.|:|..|||..:.|.|:|||..||:||:.|.|::..:|: ..|.:|::.|.:...|.
Zfish   268 QQDFELVVFLDGMAESTSSACQVRTSYIPQEIMWGYDFLPIISRSKE-GRYRVDFSNFAKVVPVP 331

  Fly   414 TPLCSARELNE 424
            |..||....||
Zfish   332 TAHCSHCYHNE 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 123/326 (38%)
kcnj1a.1NP_957329.1 IRK 24..166 CDD:366415 54/146 (37%)
IRK_C 173..342 CDD:375232 63/170 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3827
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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