DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and Kcnj16

DIOPT Version :10

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_445766.2 Gene:Kcnj16 / 29719 RGDID:61824 Length:419 Species:Rattus norvegicus


Alignment Length:371 Identity:150/371 - (40%)
Similarity:213/371 - (57%) Gaps:27/371 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SYYGLSQN----GKPFPRQPSCRSRNFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMY 125
            ||||.|..    ...:|..|.    .......||.|||.:.|:|.|||..||:......::.|::
  Rat     2 SYYGSSYRIVNVDSKYPGYPP----EHAIAEKRRARRRLLHKDGSCNVYFKHIFGEWGSYMVDIF 62

  Fly   126 TTMVDWQWRWTLLAFALSFILSWLFFALIWWLIIYTHGD-LEEPHLPENQEESGWAPCVSAIDGF 189
            ||:||.:||...:.|:||:|||||.|..|:|||...||| |.:|.:         .|||..:..|
  Rat    63 TTLVDTKWRHMFVIFSLSYILSWLIFGSIFWLIALHHGDLLSDPDI---------TPCVDNVHSF 118

  Fly   190 TSCFLFSIETQHTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLL 254
            |:.||||:|||.|||||.|..:.||..|:..:..|||...:.:.|:.|...|||..|::||||:.
  Rat   119 TAAFLFSLETQTTIGYGYRCVTEECSVAVLTVILQSILSCIINTFIIGAALAKMATARKRAQTIR 183

  Fly   255 FSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELEIGTDDSGS 319
            ||..|:|..|||.|.||:|:||.|.:|::...|||||:|.....||. ||..|.:|::..|    
  Rat   184 FSYFALIGMRDGKLCLMWRIGDFRPNHVVEGTVRAQLLRYSEDSEGR-MTMAFKDLKLVND---- 243

  Fly   320 DLFFIWPMVIEHKIDENSPLYNLNATDMLQDKFEIVVILEGTVESTGQSTQARSSYINTEILWGH 384
            .:..:.|:.|.|:||..||||.|:...:.:|.|||:|....|.:|||.|.|:||||:..||||||
  Rat   244 QIILVTPVTIVHEIDHESPLYALDRKAVAKDNFEILVTFIYTGDSTGTSHQSRSSYVPREILWGH 308

  Fly   385 RFDPVVLYNKDLQAYEIDYARFNETTQVDTPLCSARELNEIYKIQE 430
            ||..|:...:  :.|:::..:|..:.:|..|.|||::|:  :|.|:
  Rat   309 RFHDVLEVKR--KYYKVNCLQFEGSVEVYAPFCSAKQLD--WKDQQ 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..246 CDD:460023 61/146 (42%)
IRK_C 253..424 CDD:465439 70/170 (41%)
Kcnj16NP_445766.2 IRK 37..173 CDD:460023 60/144 (42%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:F1NHE9 131..136 4/4 (100%)
IRK_C 182..349 CDD:465439 71/175 (41%)

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