DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and Kcnj1

DIOPT Version :10

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_063120966.1 Gene:Kcnj1 / 24521 RGDID:2957 Length:474 Species:Rattus norvegicus


Alignment Length:428 Identity:155/428 - (36%)
Similarity:236/428 - (55%) Gaps:52/428 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 TSYYGLSQNGKPFPRQPSCRSRNFRPG-----------------------------------SMR 93
            :|..||:.:.:|..|.    |...|||                                   ...
  Rat    59 SSQLGLTSDFQPMKRM----SLEQRPGFSQKRGWVGTRYGQIRALTERMFKHLRRWFVTHIFGRS 119

  Fly    94 RVRRRAVFKNGDCNVVQKHLQ-RRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIWWL 157
            |.|.|.|.|.|.||:...::. :.|..|..|::||::|.:||:.:..|..:|:.||..|.|:|::
  Rat   120 RQRARLVSKEGRCNIEFGNVDAQSRFIFFVDIWTTVLDLKWRYKMTVFITAFLGSWFLFGLLWYV 184

  Fly   158 IIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFMMC 222
            :.|.|.||.|.:.|:|:     .|||..|:|.||.||||:|||.|||||.|..:.:|..|||::.
  Rat   185 VAYVHKDLPEFYPPDNR-----TPCVENINGMTSAFLFSLETQVTIGYGFRFVTEQCATAIFLLI 244

  Fly   223 FQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGV 287
            ||||.||:.::||.|.:.||::|.|:||:|:.|||:|||.:|.|.|.|:.||.::|||.:||:.:
  Rat   245 FQSILGVIINSFMCGAILAKISRPKKRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLIGSHI 309

  Fly   288 RAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQDKF 352
            ..:|::|..|.|||.:....|.:....|....:||||.|:.|.|.||.|||.:::.|..:.|..|
  Rat   310 YGKLLKTTITPEGETIILDQTNINFVVDAGNENLFFISPLTIYHIIDHNSPFFHMAAETLSQQDF 374

  Fly   353 EIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVDTP-- 415
            |:||.|:||||||..:.|.|:||:..|:|||:||.|:|...|: ..|.:|:..|.:|.:|:||  
  Rat   375 ELVVFLDGTVESTSATCQVRTSYVPEEVLWGYRFVPIVSKTKE-GKYRVDFHNFGKTVEVETPHC 438

  Fly   416 -LCSARELNEIYKIQEGFRTPAETTFTMRQLSHNHSDQ 452
             :|...|.:...:::.|:..|   .|.:.::......|
  Rat   439 AMCLYNEKDARARMKRGYDNP---NFVLSEVDETDDTQ 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..246 CDD:460023 62/146 (42%)
IRK_C 253..424 CDD:465439 72/173 (42%)
Kcnj1XP_063120966.1 None

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