DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and irk-2

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001368610.1 Gene:irk-2 / 191695 WormBaseID:WBGene00002150 Length:497 Species:Caenorhabditis elegans


Alignment Length:370 Identity:167/370 - (45%)
Similarity:237/370 - (64%) Gaps:16/370 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LSQNGK-PFPRQPSCRSRNFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVDWQ 132
            |.:|.| ||.:.|       |.|..||:|.|.|.|.|.||:..|::.::|.::..|::||:::.:
 Worm    41 LVKNKKYPFFKTP-------RLGGSRRIRNRLVQKQGLCNISLKNVPKQRRKYFSDIFTTVIEMK 98

  Fly   133 WRWTLLAFALSFILSWLFFALIWWLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSI 197
            |||.||.|:|||::||.|||.:::||...|||:|:      ...:.|.||:..:....:.||||.
 Worm    99 WRWCLLYFSLSFMISWSFFATVYFLIAKQHGDIEQ------IANATWTPCIVNVHNELNAFLFSF 157

  Fly   198 ETQHTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVIC 262
            .||.|||||.|..:..||..|..||||.::|||:...||||:|:|:.|..:||.||:|||:||||
 Worm   158 TTQTTIGYGFRYPTDACPLTIVTMCFQFMWGVMTQTLMAGIIFSKLARPIKRAATLIFSKNAVIC 222

  Fly   263 QRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDLFFIWPM 327
            .|||.|.|:|||||||||.:..|.||.|:|:...|.|||::..:..::::|.|.....:|.|||:
 Worm   223 LRDGKLCLLFRVGDMRKSSLAEAHVRLQMIKRCVTYEGELLPFHQFDMDVGYDQGLDRVFVIWPI 287

  Fly   328 VIEHKIDENSPLYNLNATDMLQDKFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLY 392
            .|.|:|||.|||:.:.|.|:...||||:.||||.|||.|.:||||:||:.:||||||||:.:|.|
 Worm   288 TICHEIDERSPLWEIGADDLKSAKFEIIAILEGVVESVGSTTQARTSYLPSEILWGHRFEKLVHY 352

  Fly   393 NKDLQAYEIDYARFNETTQVDTPLCSARELNEIYKIQEGFRTPAE 437
            .|:...|.||:.:|:....|:||.|||.|:..:.  .||....:|
 Worm   353 KKENGQYNIDFGKFHNVYSVNTPTCSAAEIERLR--SEGIFNESE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 154/333 (46%)
irk-2NP_001368610.1 IRK 66..206 CDD:395797 61/145 (42%)
IRK_C 213..387 CDD:407551 87/175 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I1544
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7793
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14333
orthoMCL 1 0.900 - - OOG6_101017
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X128
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.930

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