DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and irk-1

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_509138.2 Gene:irk-1 / 180944 WormBaseID:WBGene00002149 Length:544 Species:Caenorhabditis elegans


Alignment Length:424 Identity:166/424 - (39%)
Similarity:240/424 - (56%) Gaps:44/424 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LSQNGKPF--PRQPSCRS----------RN----FRPGSMRRVRRRAVFKNGDCNVVQKHLQRRR 117
            |..||:|.  ||:.|...          ||    :|..:.:..:.|.|.|||.|||...::.::.
 Worm    29 LIANGRPSPPPRRTSLAESIRTLAFTARRNSSPLYRKSTKKLKKSRLVGKNGICNVYNTNVPKKD 93

  Fly   118 VRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIWWLIIYTHGDLEEPHLPENQEESGWAPC 182
            .::|:|::|||:|.:|||.|:.||.:|:|||..|...::||...||||..| .|.|.     ..|
 Worm    94 RQYLRDIFTTMIDVKWRWMLMLFASAFVLSWSIFGTTYYLIALVHGDLSLP-TPVNH-----TAC 152

  Fly   183 VSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAK 247
            |..:|...|.|||::||.||||||.|..:.||..|..::|.|:|..::..:||.|||||||.|.|
 Worm   153 VMNLDSVYSSFLFAVETHHTIGYGHRYITTECYLAGAIVCLQAICALLLQSFMVGIVFAKMARPK 217

  Fly   248 QRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELEI 312
            :||:|::||..||||.|||.|..:.||||||.:|::.|.||.|.|..:.|.|||:...:..|:::
 Worm   218 KRAETIIFSDKAVICLRDGQLCFLCRVGDMRNTHLVEAHVRLQFITDRETNEGEIEPLHQFEMKV 282

  Fly   313 GTDDSGSD-LFFIWPMVIEHKIDENSPLYNLNATDMLQDKFEIVVILEGTVESTGQSTQARSSYI 376
            |...:..| ||.:||..:.|.||..|||||.|...::..:|||:|:|||.|||||.:.||::||:
 Worm   283 GPSIADDDRLFLVWPTTLCHVIDSRSPLYNYNQQTLMSAQFEIIVLLEGIVESTGMTAQAKTSYL 347

  Fly   377 NTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVDTPLCSARE-------LNEIY-------K 427
            .:|:||||||..:|.|.:...:|:|||..|:.|..|.||..|..|       |.:.|       |
 Worm   348 PSEVLWGHRFRKLVTYQRSNGSYQIDYDLFHSTYPVRTPAMSPAEFYSSKPNLKDYYCHDSHEHK 412

  Fly   428 IQEG-------FRTPAETTFTMRQLSHNHSDQAS 454
            :::.       ..:|:..::....|:|..|...|
 Worm   413 LEDNRSSDSTPLPSPSPYSYPSTPLNHFQSSSNS 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 150/355 (42%)
irk-1NP_509138.2 IRK 76..405 CDD:279361 148/334 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 154 1.000 Domainoid score I2606
eggNOG 1 0.900 - - E1_KOG3827
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 1 1.000 - - FOG0000937
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101017
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.780

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