DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and Kcnj3

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001342047.1 Gene:Kcnj3 / 16519 MGIID:104742 Length:501 Species:Mus musculus


Alignment Length:356 Identity:156/356 - (43%)
Similarity:226/356 - (63%) Gaps:11/356 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 RRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIWWL 157
            ::.|:|.|.|||.|||...:|.....|:|.|::||:||.:|||.|..|.|::.::|||.|.:||:
Mouse    40 KKKRQRFVDKNGRCNVQHGNLGSETSRYLSDLFTTLVDLKWRWNLFIFILTYTVAWLFMASMWWV 104

  Fly   158 IIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFMMC 222
            |.||.|||.:.|:      ..:.|||:.:..|.|.|||.|||:.|||||.|..:.:|||.|.:..
Mouse   105 IAYTRGDLNKAHV------GNYTPCVANVYNFPSAFLFFIETEATIGYGYRYITDKCPEGIILFL 163

  Fly   223 FQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGV 287
            ||||.|.:..||:.|.:|.||::.|:||:||:||:||||..|||.|:||||||::|.||::.|.:
Mouse   164 FQSILGSIVDAFLIGCMFIKMSQPKKRAETLMFSEHAVISMRDGKLTLMFRVGNLRNSHMVSAQI 228

  Fly   288 RAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQDKF 352
            |.:|::::.|.|||.:.....||::|.......||.:.|:.|.|.||..||.|:|:...|..::|
Mouse   229 RCKLLKSRQTPEGEFLPLDQLELDVGFSTGADQLFLVSPLTICHVIDAKSPFYDLSQRSMQTEQF 293

  Fly   353 EIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVDTPLC 417
            |:||||||.||:||.:.|||:||...|:||||||.||:...:..  :::||::|:.|.:|.||..
Mouse   294 EVVVILEGIVETTGMTCQARTSYTEDEVLWGHRFFPVISLEEGF--FKVDYSQFHATFEVPTPPY 356

  Fly   418 SARELNEIYKIQEGFRTPAETTFTMRQLSHN 448
            |.:|..|:..:......||.|....|   ||
Mouse   357 SVKEQEEMLLMSSPLIAPAITNSKER---HN 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 148/333 (44%)
Kcnj3NP_001342047.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40 156/356 (44%)
IRK 47..187 CDD:395797 66/145 (46%)
Selectivity filter. /evidence=ECO:0000250 143..148 4/4 (100%)
IRK_C 194..364 CDD:407551 77/171 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..501
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837120
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3827
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8723
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

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