DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj4

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_002934259.1 Gene:kcnj4 / 100485222 XenbaseID:XB-GENE-493748 Length:442 Species:Xenopus tropicalis


Alignment Length:369 Identity:174/369 - (47%)
Similarity:233/369 - (63%) Gaps:10/369 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 TSYYGLSQNGKPFPRQPSC------RSRNFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQ 122
            :|.|.:....:...|.||.      .|....|.|.|:.|.|.|.|||.|||...:|..:..|::.
 Frog     6 SSRYSIVSTDEEGLRMPSLGANGNWTSSLHHPHSRRKRRNRFVKKNGQCNVYFANLSNKSQRYMA 70

  Fly   123 DMYTTMVDWQWRWTLLAFALSFILSWLFFALIWWLIIYTHGDL-EEPHLPENQEESGWAPCVSAI 186
            |::||.||.:||:.||.|:.:|:.||||||.::|.|.:.|||| ....:.....:....||:..:
 Frog    71 DIFTTCVDTRWRYMLLIFSATFLASWLFFAFLFWCIAFLHGDLGTSSGVIAGGRQGPPKPCLMHV 135

  Fly   187 DGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQ 251
            :.|...||||:|||.|||||.|..:.|||.||..:..|||.|.:..:||.|.:.|||.|.|:|||
 Frog   136 NSFVEAFLFSVETQTTIGYGFRCVTDECPLAILAVVAQSILGCLIDSFMIGTIMAKMARPKKRAQ 200

  Fly   252 TLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELEIGTDD 316
            |||||.||||..|||.|.||:|||::|||||:.|.|||||||...|:|||.:.....:|.:|.|.
 Frog   201 TLLFSHHAVIALRDGKLCLMWRVGNLRKSHIVEAHVRAQLIRPYVTQEGEYLPVDQRDLNVGYDS 265

  Fly   317 SGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQDKFEIVVILEGTVESTGQSTQARSSYINTEIL 381
            ....:|.:.|::|.|:|||.||||.:....:..:.|||||||||.||:|..:|||||||:.:||.
 Frog   266 GLDRIFLVSPIIIVHEIDEESPLYTMGKEQLEGEDFEIVVILEGMVEATAMTTQARSSYLASEIR 330

  Fly   382 WGHRFDPVVLYNKDLQAYEIDYARFNETTQV-DTPLCSARELNE 424
            |||||:|||...|:  .|::||:.|::|.|| .||:||||||:|
 Frog   331 WGHRFEPVVFEEKN--HYKVDYSHFHKTYQVPGTPVCSARELHE 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 163/327 (50%)
kcnj4XP_002934259.1 IRK_N 1..47 CDD:369890 10/40 (25%)
IRK 48..195 CDD:366415 63/146 (43%)
IRK_C 202..372 CDD:375232 93/171 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 201 1.000 Domainoid score I2943
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9384
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X128
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.030

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