DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irk2 and kcnj9

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_009297143.1 Gene:kcnj9 / 100334285 ZFINID:ZDB-GENE-081104-42 Length:503 Species:Danio rerio


Alignment Length:436 Identity:174/436 - (39%)
Similarity:257/436 - (58%) Gaps:34/436 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NFSTHSAAPTSTTIPTTTQANGGEQATQPLKKAIEADPDSLDSVISNPQSYPITIVPNRPTSYYG 68
            |....|....|.::|..      |:..:|:::|.:..|.:.:...|....:.:|.....||.  .
Zfish     5 NTGFSSCPEESLSLPVP------EKGEEPVEEAPKEAPPTDEQNTSEELGHVVTTETAPPTQ--A 61

  Fly    69 LSQNGKPFPRQPSCRSR-----------------NFRPGSMRRVRRRAVFKNGDCNVVQKHLQRR 116
            .|.|...|..:.:.|..                 .|.....:|.|:|.|.|||.|| ||....|.
Zfish    62 PSNNSMTFQDKMAAREAQANQHRKKIQVVGQERGRFGWARSKRKRQRYVEKNGRCN-VQHGNMRE 125

  Fly   117 RVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIWWLIIYTHGDLEEPHLPENQEESGWAP 181
            ..|:|.|::||:||..||.:||.|.:::.::||||..||:||.|..|||:  ||    |:..|.|
Zfish   126 TYRYLTDIFTTLVDLNWRCSLLVFVMAYAVTWLFFGAIWYLIAYCRGDLD--HL----EDESWTP 184

  Fly   182 CVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRA 246
            ||:.::||.|.|||||||:.|||||.|..:.:||....::..|:|.|.|.:|||.|.:|.|:::.
Zfish   185 CVNNVNGFISAFLFSIETETTIGYGYRVITDQCPVGTMLLLLQAILGSMVNAFMVGCMFVKISQP 249

  Fly   247 KQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELE 311
            .:||:||:||::|||..||..|.|||||||:|.|||:||.:||:||::|.|:|||.:....|::.
Zfish   250 NKRAETLVFSRNAVISLRDDKLCLMFRVGDLRSSHIVGANMRAKLIKSKQTQEGEFIPLDQTDIS 314

  Fly   312 IGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQDKFEIVVILEGTVESTGQSTQARSSYI 376
            :|.:.....||.:.|:||.|:||..||.::::...:.::.|||||||||.||:||.:.||||||:
Zfish   315 VGFETGDDRLFLVSPLVISHEIDVRSPFWDMSQNQLEKEDFEIVVILEGMVEATGMTCQARSSYL 379

  Fly   377 NTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVDTPLCSAREL 422
            ..|::|||||.|::...:..  :::||..|:.|.:||||.||||||
Zfish   380 AEEVMWGHRFSPMMCLAEGF--FDVDYGAFHHTFEVDTPSCSAREL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 154/323 (48%)
kcnj9XP_009297143.1 IRK 110..419 CDD:279361 148/317 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 195 1.000 Domainoid score I3095
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I2116
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 1 1.000 - - FOG0000937
OrthoInspector 1 1.000 - - mtm6353
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X128
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.080

Return to query results.
Submit another query.