DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj3a

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_002663356.2 Gene:kcnj3a / 100330491 ZFINID:ZDB-GENE-100922-16 Length:490 Species:Danio rerio


Alignment Length:344 Identity:152/344 - (44%)
Similarity:219/344 - (63%) Gaps:8/344 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 RRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLFFALIWWL 157
            ||.|:|.|.|||.|||...:|.....|:|.|::||:||.:|||.|..|.|::.::|||.|.:||:
Zfish    27 RRKRQRFVDKNGRCNVQHGNLGGETSRYLSDLFTTLVDLKWRWNLFIFILTYTVAWLFMAFMWWV 91

  Fly   158 IIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGYGVRTTSPECPEAIFMMC 222
            |.|..|||...|      :..:.|||:.:..|.|.|||.|||:.|||||.|..:.:|||.|.:..
Zfish    92 IAYIRGDLNRTH------DEKYTPCVANVYNFPSAFLFFIETEATIGYGHRYITDKCPEGIILFL 150

  Fly   223 FQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGV 287
            ||||.|.:..||:.|.:|.||::.|:||:||:||::|.|..|||.|:||||||::|.||::.|.:
Zfish   151 FQSILGSIVDAFLIGCMFIKMSQPKKRAETLMFSENAAISMRDGKLTLMFRVGNLRNSHMVSAQI 215

  Fly   288 RAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQDKF 352
            |.:|::::.|.|||.:.....||::|.......||.:.|:.|.|.||..||.|.|:...|..::|
Zfish   216 RCKLLKSRQTPEGEFLPLDQLELDVGFSTGADQLFLVSPLTICHVIDTKSPFYELSQHSMQTEQF 280

  Fly   353 EIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYEIDYARFNETTQVDTPLC 417
            ||||||||.||:||.:.|||:||...|:||||||.||:...:..  :::||::|:.|.:|.||..
Zfish   281 EIVVILEGIVETTGMTCQARTSYTEDEVLWGHRFFPVISLEEGF--FKVDYSQFHATFEVPTPPY 343

  Fly   418 SARELNEIYKIQEGFRTPA 436
            ||:|.:|...:......|:
Zfish   344 SAKEQDEALLMSSPLMAPS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 147/333 (44%)
kcnj3aXP_002663356.2 IRK 34..350 CDD:279361 146/323 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580683
Domainoid 1 1.000 195 1.000 Domainoid score I3095
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I2116
OMA 1 1.010 - - QHG59160
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6353
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.010

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