DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk2 and kcnj13

DIOPT Version :9

Sequence 1:NP_001287485.1 Gene:Irk2 / 42770 FlyBaseID:FBgn0039081 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001096437.1 Gene:kcnj13 / 100125048 XenbaseID:XB-GENE-983214 Length:374 Species:Xenopus tropicalis


Alignment Length:369 Identity:118/369 - (31%)
Similarity:189/369 - (51%) Gaps:31/369 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 RQPSCRSRNFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFAL 142
            |.|.|.       .:.....|.|.|:|...|....:|.:.:.:|:|::..::|.:|||.:|||:.
 Frog    16 RSPKCT-------LLSPCTHRLVTKDGHSMVKAGRMQGQGLTYLRDIWGLLLDMRWRWMMLAFSA 73

  Fly   143 SFILSWLFFALIWWLIIYTHGDLEEPH--LPENQEESGWAPCVSAIDGFTSCFLFSIETQHTIGY 205
            ||:..||.||:.|:|:...:|||...|  .|||.     ..||..|..||:.|.||:|||.||||
 Frog    74 SFLAHWLLFAVFWYLLAEMNGDLAVDHDAPPENH-----TICVKYITSFTAAFSFSLETQLTIGY 133

  Fly   206 GVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRAQTLLFSKHAVICQRDGTLSL 270
            |....|.:||.||.::..|.:.|:|..||:.|:..||:.|.|.|..::.||:.||:...:|...|
 Frog   134 GTMFPSGDCPSAIALLAVQMLLGLMLEAFITGVFVAKIARPKNRTPSIRFSRLAVVGSPEGKPCL 198

  Fly   271 MFRVGDMRKSHIIGAGVRAQLIRTKSTKEGEVMTQYFTELEIGTDDSGSDL-FFIWPMVIEHKID 334
            ||:|.:.|.|.:....|...|.:.:.  :|::. |...|..:.:..||::. ||.:|:...|.:.
 Frog   199 MFQVANTRSSPLTMVKVSGILYQERG--DGQIQ-QANVEFSLDSQASGAECPFFTFPLTYSHSLC 260

  Fly   335 ENSPLYNLNATDMLQD--KFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVL------ 391
            ..|||..|...::|..  ..|:||.|..|.||:|:..|.|:||:.:|||.||||.|.:.      
 Frog   261 SGSPLSVLLQRELLSSAGHLELVVCLSATQESSGEICQCRTSYLPSEILQGHRFAPCLTRRLEGG 325

  Fly   392 YNKDLQAY-----EIDYARFNETTQVDTPLCSARELNEIYKIQE 430
            |...::::     |:......:..:.|..:|:..:..:.::|.|
 Frog   326 YRICMESFGRPLPELPQPSHRQLYRTDLEVCANGQRGDTFQICE 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk2NP_001287485.1 IRK 100..434 CDD:279361 114/347 (33%)
kcnj13NP_001096437.1 Ion_trans_2 31..174 CDD:389812 58/147 (39%)
IRK_C 181..348 CDD:375232 49/169 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D956263at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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