DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4374 and CG17806

DIOPT Version :10

Sequence 1:NP_651146.2 Gene:CG4374 / 42767 FlyBaseID:FBgn0039078 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster


Alignment Length:70 Identity:26/70 - (37%)
Similarity:33/70 - (47%) Gaps:16/70 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   649 HYCSICAKGFKDKYSVNVHIRTHTGEKPFACSLCGKSFRQKAHLAKHYQTHMTQKNNGNIIKGGS 713
            |.||.|.|.||...::..||..||||:||.|.||...|.::..||.||::               
  Fly   348 HVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQTFFNRRNALATHYKS--------------- 397

  Fly   714 GKHQR 718
             ||.|
  Fly   398 -KHHR 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4374NP_651146.2 zf-C2H2_4 649..671 CDD:464025 9/21 (43%)
C2H2 Zn finger 651..671 CDD:275370 8/19 (42%)
zf-H2C2_2 667..688 CDD:463886 12/20 (60%)
C2H2 Zn finger 679..699 CDD:275370 8/19 (42%)
CG17806NP_650658.1 zf-AD 4..75 CDD:462262
zf-C2H2 260..282 CDD:395048
C2H2 Zn finger 262..282 CDD:275368
C2H2 Zn finger 290..311 CDD:275368
C2H2 Zn finger 319..339 CDD:275368
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
ZnF_U1 375..407 CDD:197732 13/43 (30%)
C2H2 Zn finger 378..396 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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