DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4374 and CG1602

DIOPT Version :10

Sequence 1:NP_651146.2 Gene:CG4374 / 42767 FlyBaseID:FBgn0039078 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster


Alignment Length:47 Identity:20/47 - (42%)
Similarity:29/47 - (61%) Gaps:0/47 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   649 HYCSICAKGFKDKYSVNVHIRTHTGEKPFACSLCGKSFRQKAHLAKH 695
            |.|:.|.:.|.....:.:|||||||.||:.|..|||:||.::.:..|
  Fly   423 HKCTHCERSFAVMSDLQLHIRTHTGHKPYVCEHCGKAFRLRSQMTLH 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4374NP_651146.2 zf-C2H2_4 649..671 CDD:464025 7/21 (33%)
C2H2 Zn finger 651..671 CDD:275370 6/19 (32%)
zf-H2C2_2 667..688 CDD:463886 14/20 (70%)
C2H2 Zn finger 679..699 CDD:275370 7/17 (41%)
CG1602NP_610291.2 MADF_DNA_bdg 157..244 CDD:463144
MADF_DNA_bdg 273..356 CDD:463144
C2H2 Zn finger 367..388 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..460 CDD:463886 13/22 (59%)
C2H2 Zn finger 453..470 CDD:275368 7/17 (41%)
C2H2 Zn finger 482..502 CDD:275368
C2H2 Zn finger 510..530 CDD:275368
C2H2 Zn finger 538..559 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.