DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4374 and CG17328

DIOPT Version :10

Sequence 1:NP_651146.2 Gene:CG4374 / 42767 FlyBaseID:FBgn0039078 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:85 Identity:30/85 - (35%)
Similarity:38/85 - (44%) Gaps:28/85 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   649 HYCSICAKGFKDKYSVNVHIRTHTGEKPFACSLCGKSF--------RQKAH-------------- 691
            :.||.|.:.|..||::.||.|||||:|||.|.:|.|.|        .||.|              
  Fly   175 YQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKG 239

  Fly   692 ------LAKHYQTHMTQKNN 705
                  |:||..||...||:
  Fly   240 FYTAGDLSKHMITHTGIKNH 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4374NP_651146.2 zf-C2H2_4 649..671 CDD:464025 9/21 (43%)
C2H2 Zn finger 651..671 CDD:275370 9/19 (47%)
zf-H2C2_2 667..688 CDD:463886 13/28 (46%)
C2H2 Zn finger 679..699 CDD:275370 10/47 (21%)
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 18/35 (51%)
C2H2 Zn finger 149..169 CDD:275368
C2H2 Zn finger 177..197 CDD:275368 9/19 (47%)
zf-H2C2_2 189..213 CDD:463886 13/23 (57%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
C2H2 Zn finger 233..253 CDD:275368 3/19 (16%)
zf-H2C2_2 245..270 CDD:463886 7/15 (47%)
C2H2 Zn finger 261..282 CDD:275368
C2H2 Zn finger 318..338 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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