DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42827 and aplp2

DIOPT Version :9

Sequence 1:NP_651142.3 Gene:CG42827 / 42763 FlyBaseID:FBgn0262009 Length:116 Species:Drosophila melanogaster
Sequence 2:XP_005159308.1 Gene:aplp2 / 796801 ZFINID:ZDB-GENE-061009-28 Length:776 Species:Danio rerio


Alignment Length:83 Identity:23/83 - (27%)
Similarity:40/83 - (48%) Gaps:12/83 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DSDSLQEQYEREQYNIRKK------------ICLQSSEYGKCKGRRKLWFYNPKKSKCQVFIYSN 73
            |.||.::..::|:..:.:|            :|...:|.|.|:.....|.::.::.||..|||..
Zfish   283 DRDSEEKDVKKEKAVMPEKQDDDKTLQEVEAVCSLEAETGPCRASMPRWHFDMQQRKCVRFIYGG 347

  Fly    74 CGGNGNLFYTKESCVEFC 91
            |.||.|.|.::|.|:..|
Zfish   348 CAGNRNNFDSEEYCMVVC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42827NP_651142.3 KU 40..92 CDD:238057 18/52 (35%)
aplp2XP_005159308.1 A4_EXTRA 31..195 CDD:128326
APP_N 38..138 CDD:280358
APP_Cu_bd 140..195 CDD:289676
Kunitz_BPTI 314..366 CDD:278443 18/52 (35%)
APP_E2 371..553 CDD:289677
APP_amyloid 722..772 CDD:287486
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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