DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4408 and cpb2

DIOPT Version :9

Sequence 1:NP_651141.2 Gene:CG4408 / 42762 FlyBaseID:FBgn0039073 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001025617.1 Gene:cpb2 / 595005 XenbaseID:XB-GENE-969491 Length:421 Species:Xenopus tropicalis


Alignment Length:338 Identity:114/338 - (33%)
Similarity:185/338 - (54%) Gaps:23/338 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 NVTHRVLNYNFQALIDANYLEVAPEDTKPEEFDWKRYHPLESINAWLKKLAETHPEVL-LVELGV 206
            ::.:.||..|.|.||:...............| :::||.||.|..|::.:.|.|.::| .:.:|.
 Frog    87 SILYMVLVNNAQELIEQQ
TFNDTSNQRSATSF-YEQYHTLEDIYYWMQHMVEKHSDMLQRIHIGY 150

  Fly   207 SAQGRPILGVQIAFDNEN-RTTVFVESGIHAREWIAPATATYIIDQLVN--SKDSAVQALARSQR 268
            |.:.||:..::::...:. :..|:::.||||||||:||...:.:...|.  ..|.::..|.|...
 Frog   151 SFENRPLYVLKVSGKEKTAKHAVWIDCGIHAREWISPAFCLWFVGHAVEYYGVDLSMTKLLRYLD 215

  Fly   269 WYIFPTVNPDGYQYTFKG-DRMWRKNRALF--GICRGVDLNRNFPFHWNVTGASGDPCRYDYSGP 330
            :||.|.:|.||||:::.. :|||||||:.:  ..|.|.||||||...|...|||.|||...|.||
 Frog   216 FYILPVMNADGYQFSWTAKNRMWRKNRSKYTKSNCIGTDLNRNFDAGWCGPGASSDPCHEIYCGP 280

  Fly   331 SAASEVETQRMIEFIRHRVESERIRTFISLHSYSQMIMFPYGHSAERVDNYHDLTDIGKLAANKI 395
            .|.||.|...::.|::.  ....::.:|::||||||::|||.::.::..::.:|..:.|..|..|
 Frog   281 YAESEPEVSAVVSFLKK--HQNVVKGYITVHSYSQMVLFPYSYTNKKSKDHDELLLLSKKVAEGI 343

  Fly   396 KDVSGRIYKSGSIYETIYPSSGGSKDWAHGQLKIPITFSYELR-----GPADSEDLFILSAKEIE 455
            :..|...|..|:..||||.:.|||.|||: .|.|..:|::|||     |       |:|..:.|:
 Frog   344 RSTSRNKYMYGAGAETIYLAPGGSDDWAY-DLGIKYSFTFELRDKGMYG-------FLLPPQLIK 400

  Fly   456 PTAAEAFASIQTI 468
            ||.:|...:::.|
 Frog   401 PTCSEGITAVKII 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4408NP_651141.2 Propep_M14 88..159 CDD:280416 6/15 (40%)
M14_CP_A-B_like 179..472 CDD:199844 107/302 (35%)
cpb2NP_001025617.1 Propep_M14 33..104 CDD:366995 6/16 (38%)
M14_CPB2 118..418 CDD:349465 108/307 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X86
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.