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Protein Alignment CG4408 and Cpb2

DIOPT Version :9

Sequence 1:	NP_651141.2	Gene:	CG4408 / 42762	FlyBaseID:	FBgn0039073	Length:	479	Species:	Drosophila melanogaster
Sequence 2:	NP_062749.2	Gene:	Cpb2 / 56373	MGIID:	1891837	Length:	422	Species:	Mus musculus

Alignment Length:	350	Identity:	118/350 - (33%)
Similarity:	190/350 - (54%)	Gaps:	21/350 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly   133 ADFDDLVHSYNVTH---RVLNYNFQALIDANYLE--VAPEDTKPEEFDWKRYHPLESINAWLKKL 192
            :|.|.:....||:.   .||..|.:.||:.....  |:|   :.....:::||.|..|.:|::.:
Mouse    74 SDVDSVKAHLNVSRIPFNVLMNNVEDLIEQQTFNDTVSP---RASASYYEQYHSLNEIYSWIEVI 135

  Fly   193 AETHPEVL-LVELGVSAQGRPILGVQIAFDNEN-RTTVFVESGIHAREWIAPATATYIIDQLV-- 253
            .|.||::| .:.:|.|.:..|:..::::...:. :..::::.||||||||:||...:.|..:.
Mouse   136 TEQHPDMLQKIYIGSSFEKYPLYVLKVSGKEQRIKNAIWIDCGIHAREWISPAFCLWFIGYVTQF 200

  Fly   254 NSKDSAVQALARSQRWYIFPTVNPDGYQYTFKGDRMWRKNRALF--GICRGVDLNRNFPF-HWNV 315
            :.|::....|.|...:||.|.:|.|||.||:|.:|||||||:..  ..|.|.||||||.. ||..
Mouse   201 HGKENLYTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWRKNRSAHKNNRCVGTDLNRNFASKHWCE 265

  Fly   316 TGASGDPCRYDYSGPSAASEVETQRMIEFIRHRVESERIRTFISLHSYSQMIMFPYGHSAERVDN 380
            .|||...|...|.|....||.|.:.:.:|:|..:  :.|:.:||:|||||.|:|||.::..:..:
Mouse   266 KGASSSSCSETYCGLYPESEPEVKAVADFLRRNI--DHIKAYISMHSYSQQILFPYSYNRSKSKD 328

  Fly   381 YHDLTDIGKLAANKIKDVSGRI-YKSGSIYETIYPSSGGSKDWAHGQLKIPITFSYELRGPADSE 444
            :.:|:.:...|...|:.::... |..||..|::|.:.|||.||.: .|.|..:|:.|||......
Mouse   329 HEELSLVASEAVRAIESINKNTRYTHGSGSESLYLAPGGSDDWIY-DLGIKYSFTIELRDTGRYG 392

  Fly   445 DLFILSAKEIEPTAAEAFASIQTIV 469
              |:|..:.|:||.|||.|:|..||
Mouse   393 --FLLPERYIKPTCAEALAAISKIV 415

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.