DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4408 and Cpa4

DIOPT Version :9

Sequence 1:NP_651141.2 Gene:CG4408 / 42762 FlyBaseID:FBgn0039073 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001102816.1 Gene:Cpa4 / 502736 RGDID:1563619 Length:421 Species:Rattus norvegicus


Alignment Length:403 Identity:122/403 - (30%)
Similarity:209/403 - (51%) Gaps:30/403 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 RIYQVELASEEHVRLFQALEQASDSCSF-MGHARQPG---QKLTIMVTGAKVADFDDLVHSYNVT 145
            :::::.:.:.:.:|   .|.:..:|..| :...:.|.   :.:.|:|....:......:.|..:.
  Rat    25 QVFRINVRNGDEIR---KLTELVNSDHFKLNVWKSPSTFDRPVDILVPSVSLLPVKSFLKSQGLD 86

  Fly   146 HRVLNYNFQALIDANYLEVAPEDTKPE--EFDWKRYHPLESINAWLKKLAETHPEVL-LVELGVS 207
            :.|...|.|||:|....|:...:.:..  :|::..||..|:|...:..:|...|::. .|::|.:
  Rat    87 YSVTIDNLQALLDIEDEEMQHNEGRERSGDFNYGSYHSPEAIYHEMDSIATDFPDLASRVKIGET 151

  Fly   208 AQGRP--ILGVQIAFDNENRTTVFVESGIHAREWIAPATATYIIDQLVN--SKDSAVQALARSQR 268
            .:.||  :|........:.|..:::.:||||||||:.|||.:...::|.  .||.||.::.....
  Rat   152 FEKRPMYVLKFSTGGGGKKRPAIWLNAGIHAREWISQATAIWTARKIVTDYQKDPAVTSILEKMD 216

  Fly   269 WYIFPTVNPDGYQYTFKGDRMWRKNRAL--FGICRGVDLNRNFPFHWNVT----GASGDPCRYDY 327
            .::.|..|||||.||...:|:|||.|:.  ...|.|.|.|||    ||.:    |||.:||...|
  Rat   217 IFLLPVANPDGYVYTQNQNRLWRKTRSRNPGSRCIGADPNRN----WNASFAGEGASNNPCSEVY 277

  Fly   328 SGPSAASEVETQRMIEFIRHRVESERIRTFISLHSYSQMIMFPYGHSAERVDNYHDLTDIGKLAA 392
            .|....||||.:.:::||:   :....:.||.||||||::|:|||:|.::..:..:|.|:.:.||
  Rat   278 HGSHPNSEVEVKSVVDFIQ---KHGNFKCFIDLHSYSQLLMYPYGYSVKKAPDAEELDDVARSAA 339

  Fly   393 NKIKDVSGRIYKSGSIYETIYPSSGGSKDWAHGQLKIPITFSYELRGPADSEDLFILSAKEIEPT 457
            ..:..:||..|:.|....|:||:||.|.|||:.. .|...|::|||......  |:|.|.:|.||
  Rat   340 KALASLSGTKYQVGPTCTTVYPASGSSVDWAYDN-GIKYAFTFELRDTGHYG--FLLPASQIIPT 401

  Fly   458 AAEAFASIQTIVQ 470
            |.|.:..::.|::
  Rat   402 AEETWQGLKVIME 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4408NP_651141.2 Propep_M14 88..159 CDD:280416 13/74 (18%)
M14_CP_A-B_like 179..472 CDD:199844 106/303 (35%)
Cpa4NP_001102816.1 Propep_M14 28..99 CDD:280416 13/73 (18%)
Peptidase_M14_like 117..419 CDD:299699 107/308 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351613
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100142
Panther 1 1.100 - - O PTHR11705
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X86
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.750

Return to query results.
Submit another query.